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Worm Phenotype (WP): no germ line

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <4>
+ + + + 4:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + + 3:   cell development variant [WBPhenotype:0000529] <17>(128|124) (129|49|15)
+ + 2:   gametogenesis variant [WBPhenotype:0000774] <2>(65|59) (66|27|6)
+ 1:   germ cell development variant [WBPhenotype:0000812] <8>(63|59) (64|27|6)
0:   no germ line [WBPhenotype:0000215] <2>(7|9) (7|3|1)
- 1:   no oocytes [WBPhenotype:0000291](7|9) (7|3|1)
- 1:   sperm absent [WBPhenotype:0000290](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleic acid-binding proteins0.002022Inherited
Smc hinge domain0.05314Inherited
GroEL equatorial domain-like0.06409Inherited
GroEL-intermediate domain like0.06409Inherited
GroEL apical domain-like0.06409Inherited
Sm-like ribonucleoproteins0.1902Inherited
"Winged helix" DNA-binding domain0.3751Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA replication initiator (cdc21/cdc54) N-terminal domain0.0000004499Direct
Cold shock DNA-binding domain-like0.00215Inherited
Ubiquitin-related0.00215Inherited
Smc hinge domain0.02391Inherited
Cyclin0.03938Inherited
Sm motif of small nuclear ribonucleoproteins, SNRNP0.06819Inherited
Pumilio repeat0.09806Inherited
Group II chaperonin (CCT, TRIC), ATPase domain0.1532Inherited
Group II chaperonin (CCT, TRIC), apical domain0.1532Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleic acid-binding proteins0.001704Inherited
Smc hinge domain0.04718Inherited
GroEL-intermediate domain like0.05718Inherited
GroEL equatorial domain-like0.05718Inherited
GroEL apical domain-like0.05718Inherited
Sm-like ribonucleoproteins0.1749Inherited
"Winged helix" DNA-binding domain0.3547Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.005507Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.05718Inherited
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.05718Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.05718Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)