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Worm Phenotype (WP): body size variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <4>
+ + 2:   morphology variant [WBPhenotype:0000520] <9>(441|523) (441|229|64)
+ 1:   organism morphology variant [WBPhenotype:0000535] <17>(335|434) (337|187|53)
+ 1:   organism segment morphology variant [WBPhenotype:0000582] <17>(67|65) (70|22|11)
+ 1:   adult body morphology variant [WBPhenotype:0000036] <17>(67|65) (70|22|11)
+ 1:   body morphology variant [WBPhenotype:0000072] <17>(67|65) (70|23|11)
+ 1:   developmental morphology variant [WBPhenotype:0000934] <17>(67|65) (70|22|11)
+ 1:   body region morphology variant [WBPhenotype:0000532] <17>(67|65) (70|22|11)
0:   body size variant [WBPhenotype:0000231] <6>(33|37) (34|10|7)
- 1:   body width variant [WBPhenotype:0001727] <4>(28|33) (29|7|7)
- 1:   body length variant [WBPhenotype:0001726] <3>(22|29) (23|6|4)
- 1:   body proportion variant [WBPhenotype:0002338] <2>(0|0) (0|0|0)
- 1:   large [WBPhenotype:0000319] <1>(1|2) (2|1|0)
- 1:   scrawny [WBPhenotype:0000314](0|0) (0|0|0)
- 1:   squat [WBPhenotype:0000021](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Transducin (alpha subunit), insertion domain0Direct
Insulin-like0.00000001235Direct
Hedgehog/intein (Hint) domain0.00000002013Direct
SNF-like0.0000009221Direct
Lamin A/C globular tail domain0.000002752Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000003025Direct
Nicotinic receptor ligand binding domain-like0.00002864Direct
P-loop containing nucleoside triphosphate hydrolases0.00004666Direct
Intermediate filament protein, coiled coil region0.00005002Direct
Spectrin repeat0.00005002Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.0000971Direct
Nucleotide-binding domain0.0001288Direct
SMAD MH1 domain0.0001288Direct
Transducin (heterotrimeric G protein), gamma chain0.0001919Direct
PH domain-like0.0002159Direct
Growth factor receptor domain0.0002176Direct
S-adenosylmethionine synthetase0.0002411Direct
Zn-binding ribosomal proteins0.000301Direct
Homeodomain-like0.0007093Direct
Subtilisin-like0.001037Inherited
Tim10-like0.001037Inherited
Troponin coil-coiled subunits0.009812Inherited
PYP-like sensor domain (PAS domain)0.009812Inherited
Heme-dependent peroxidases0.01193Inherited
SNARE-like0.01314Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.01563Inherited
cAMP-binding domain-like0.01659Inherited
Histone-fold0.02124Inherited
Ankyrin repeat0.03083Inherited
Protease propeptides/inhibitors0.03265Inherited
Voltage-gated potassium channels0.03376Inherited
SMAD/FHA domain0.03682Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
D-aminoacid oxidase, N-terminal domain0Direct
Branched-chain alpha-keto acid dehydrogenase PP module0Direct
G proteins0.00000008184Direct
Hedgehog C-terminal (Hog) autoprocessing domain0.0000001009Direct
Insulin-like0.0000001415Direct
SNF-like0.000002181Direct
Laminin-type module0.000006558Direct
Pleckstrin-homology domain (PH domain)0.00004697Direct
D-aminoacid oxidase-like0.00005334Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0001162Direct
Nicotinic receptor ligand binding domain-like0.000132Direct
Intermediate filament protein, coiled coil region0.0001531Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.000204Direct
PDI-like0.0002749Direct
SMAD MH1 domain0.0002749Direct
Transducin (heterotrimeric G protein), gamma chain0.0003338Direct
Lamin A/C globular tail domain0.0003608Direct
Proprotein convertase P-domain0.0004252Direct
S-adenosylmethionine synthetase0.0004252Direct
Glycosyl transferases group 10.0004252Direct
MIF4G domain-like0.0004252Direct
Clathrin adaptor core protein0.0006241Direct
Spectrin repeat0.000789Direct
Clathrin coat assembly domain0.0008333Direct
Tim10/DDP0.001813Inherited
Subtilases0.001813Inherited
Transforming growth factor (TGF)-beta0.001813Inherited
SMAD domain0.001932Inherited
Myeloperoxidase-like0.02327Inherited
cAMP-binding domain0.02327Inherited
Rhodopsin-like0.02391Inherited
Synaptotagmin-like (S variant)0.05493Inherited
Nucleosome core histones0.09803Inherited
Ankyrin repeat0.1119Inherited
Voltage-gated potassium channels0.1204Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Insulin-like0.000000009914Direct
Hedgehog/intein (Hint) domain0.00000001619Direct
SNF-like0.00000075Direct
Lamin A/C globular tail domain0.000002247Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000002472Direct
Nicotinic receptor ligand binding domain-like0.00002353Direct
P-loop containing nucleoside triphosphate hydrolases0.00003842Direct
Spectrin repeat0.00004118Direct
Intermediate filament protein, coiled coil region0.00004118Direct
Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor0.00008011Direct
Nucleotide-binding domain0.0001064Direct
SMAD MH1 domain0.0001064Direct
Transducin (heterotrimeric G protein), gamma chain0.0001587Direct
PH domain-like0.0001784Direct
Growth factor receptor domain0.0001799Direct
S-adenosylmethionine synthetase0.0001995Direct
Zn-binding ribosomal proteins0.0002495Direct
Homeodomain-like0.0005925Direct
Subtilisin-like0.0008694Direct
Tim10-like0.0008694Direct
EGF/Laminin0.001331Inherited
Troponin coil-coiled subunits0.008444Inherited
PYP-like sensor domain (PAS domain)0.008444Inherited
Heme-dependent peroxidases0.01028Inherited
SNARE-like0.01135Inherited
Thiamin diphosphate-binding fold (THDP-binding)0.01353Inherited
cAMP-binding domain-like0.01436Inherited
Histone-fold0.01851Inherited
Ankyrin repeat0.02707Inherited
Protease propeptides/inhibitors0.0287Inherited
Voltage-gated potassium channels0.0297Inherited
SMAD/FHA domain0.03247Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
51971,54373
  • 51971 - Nucleotide-binding domain
  • 54373 - FAD-linked reductases, C-terminal domain
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.000002472Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.00001494Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.0001995Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0001995Direct
    64356,49447
  • 64356 - SNARE-like
  • 49447 - Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
  • 0.0001995Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0002148Direct
    46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0003294Direct
    52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.001548Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    46966,46966,46966
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 46966 - Spectrin repeat
  • 0.0001064Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.0001995Direct
    52833,52833,52833
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 52833 - Thioredoxin-like
  • 0.0005192Direct
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0005228Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0007064Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.02027Inherited
    57424,57424,57424
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 57424 - LDL receptor-like module
  • 0.0287Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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