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Worm Phenotype (WP): pleiotropic defects severe early emb

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <4>
+ + + + + + 6:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + + + + 5:   organism development variant [WBPhenotype:0000531] <10>(504|576) (504|246|68)
+ + + + 4:   embryonic development variant [WBPhenotype:0000749] <21>(445|531) (445|231|63)
+ + + + 4:   lethal [WBPhenotype:0000062] <5>(498|574) (498|245|68)
+ + + 3:   embryonic lethal [WBPhenotype:0000050] <7>(443|531) (443|230|63)
+ + 2:   early embryonic lethal [WBPhenotype:0001100] <30>(61|63) (61|26|4)
+ 1:   other abnormality early emb [WBPhenotype:0001007] <2>(11|6) (11|2|1)
0:   pleiotropic defects severe early emb [WBPhenotype:0000270](11|6) (11|2|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Zn-binding ribosomal proteins0.00000000000003016Direct
Translation proteins SH3-like domain0.0000000000001392Direct
GroEL equatorial domain-like0.000000000001064Direct
GroEL-intermediate domain like0.000000000001064Direct
GroEL apical domain-like0.000000000003499Direct
Class II aaRS and biotin synthetases0.00000000003242Direct
Nucleotidylyl transferase0.00000001601Direct
Nucleic acid-binding proteins0.00000002496Direct
S15/NS1 RNA-binding domain0.0000001553Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.000009059Direct
Translation proteins0.00001252Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Group II chaperonin (CCT, TRIC), ATPase domain0.0000000000009863Direct
Group II chaperonin (CCT, TRIC), apical domain0.000000000004373Direct
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.00000000005985Direct
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.000000003418Direct
Cold shock DNA-binding domain-like0.00000002464Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00001149Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Zn-binding ribosomal proteins0.00000000000002383Direct
Translation proteins SH3-like domain0.0000000000001102Direct
GroEL-intermediate domain like0.0000000000008436Direct
GroEL equatorial domain-like0.0000000000008436Direct
GroEL apical domain-like0.00000000000278Direct
Class II aaRS and biotin synthetases0.00000000002582Direct
Nucleotidylyl transferase0.00000001286Direct
Nucleic acid-binding proteins0.00000002009Direct
S15/NS1 RNA-binding domain0.0000001255Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.000007413Direct
Translation proteins0.00001025Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000000000008436Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0000000000008436Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000000000008436Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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