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Worm Phenotype (WP): no oocytes

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <4>
+ + + + + 5:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + + + 4:   cell development variant [WBPhenotype:0000529] <17>(128|124) (129|49|15)
+ + + 3:   gametogenesis variant [WBPhenotype:0000774] <2>(65|59) (66|27|6)
+ + 2:   germ cell differentiation variant [WBPhenotype:0000894] <3>(36|39) (36|15|2)
+ + 2:   germ cell development variant [WBPhenotype:0000812] <8>(63|59) (64|27|6)
+ 1:   no differentiated gametes [WBPhenotype:0000395] <2>(7|9) (7|3|1)
+ 1:   no germ line [WBPhenotype:0000215] <2>(7|9) (7|3|1)
0:   no oocytes [WBPhenotype:0000291](7|9) (7|3|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleic acid-binding proteins0.000000006246Direct
GroEL equatorial domain-like0.000003266Direct
GroEL-intermediate domain like0.000003266Direct
GroEL apical domain-like0.000006319Direct
Smc hinge domain0.00001621Direct
Sm-like ribonucleoproteins0.0001663Direct
"Winged helix" DNA-binding domain0.0003999Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA replication initiator (cdc21/cdc54) N-terminal domain0.0000003474Direct
Smc hinge domain0.000009267Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.00005689Direct
Cold shock DNA-binding domain-like0.0001025Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0001138Direct
Group II chaperonin (CCT, TRIC), apical domain0.0001965Direct
Pumilio repeat0.0003151Direct
Cyclin0.0003175Direct
Ubiquitin-related0.0004798Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleic acid-binding proteins0.000000005012Direct
GroEL-intermediate domain like0.00000267Direct
GroEL equatorial domain-like0.00000267Direct
GroEL apical domain-like0.000005167Direct
Smc hinge domain0.0000133Direct
Sm-like ribonucleoproteins0.0001372Direct
"Winged helix" DNA-binding domain0.0003321Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000267Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00000267Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.0006707Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000267Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)