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Worm Phenotype (WP): meiotic progression during oogenesis variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <4>
+ + + + + 5:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + + + 4:   cell development variant [WBPhenotype:0000529] <17>(128|124) (129|49|15)
+ + + 3:   gametogenesis variant [WBPhenotype:0000774] <2>(65|59) (66|27|6)
+ + 2:   germ cell differentiation variant [WBPhenotype:0000894] <3>(36|39) (36|15|2)
+ + 2:   germ cell development variant [WBPhenotype:0000812] <8>(63|59) (64|27|6)
+ 1:   oogenesis variant [WBPhenotype:0000186] <5>(32|33) (32|14|2)
0:   meiotic progression during oogenesis variant [WBPhenotype:0000313] <2>(26|28) (26|12|2)
- 1:   meiotic progression prophase variant [WBPhenotype:0001824] <4>(24|23) (24|11|2)
- 1:   oocyte meiotic maturation variant [WBPhenotype:0000105] <1>(1|2) (1|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Skp1 dimerisation domain-like0Direct
GroEL equatorial domain-like0.00000000009839Direct
GroEL-intermediate domain like0.00000000009839Direct
GroEL apical domain-like0.0000000004726Direct
Sm-like ribonucleoproteins0.00000001428Direct
Translation proteins SH3-like domain0.000000198Direct
Nucleic acid-binding proteins0.000004723Direct
L30e-like0.00002275Direct
Ribosomal proteins S24e, L23 and L15e0.00002727Direct
F1F0 ATP synthase subunit C0.00002727Direct
S15/NS1 RNA-binding domain0.00002727Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.0000757Direct
Translational machinery components0.00007694Direct
"Winged helix" DNA-binding domain0.0001686Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0005471Direct
Nucleotidylyl transferase0.005446Inherited
Histone-fold0.0295Inherited
POZ domain0.02964Inherited
CCCH zinc finger0.03315Inherited
Class II aaRS and biotin synthetases0.2494Inherited
Translation proteins0.2494Inherited
Ribosomal protein S5 domain 2-like0.3126Inherited
Protein kinase-like (PK-like)0.8023Inherited
SNARE-like0.8074Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
Skp1 dimerisation domain-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00000000004663Direct
Proteasome subunits0.00000000007985Direct
Group II chaperonin (CCT, TRIC), apical domain0.0000000003992Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000001298Direct
RecA protein-like (ATPase-domain)0.000002711Direct
Anticodon-binding domain0.00001017Direct
Translational machinery components0.00002249Direct
Extended AAA-ATPase domain0.00003212Direct
L30e/L7ae ribosomal proteins0.00004742Direct
F1F0 ATP synthase subunit C0.00004742Direct
Pumilio repeat0.00009054Direct
Cold shock DNA-binding domain-like0.0001132Direct
Elongation factors0.000221Direct
Clathrin adaptor core protein0.0002924Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0009346Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.001475Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.002026Inherited
Nitrogenase iron protein-like0.002193Inherited
BTB/POZ domain0.03765Inherited
CCCH zinc finger0.05397Inherited
Nucleosome core histones0.08069Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.2694Inherited
G proteins0.3047Inherited
Protein kinases, catalytic subunit0.8598Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
GroEL-intermediate domain like0.00000000007844Direct
GroEL equatorial domain-like0.00000000007844Direct
GroEL apical domain-like0.0000000003774Direct
Sm-like ribonucleoproteins0.00000001147Direct
Translation proteins SH3-like domain0.0000001601Direct
Nucleic acid-binding proteins0.000003862Direct
L30e-like0.00001867Direct
S15/NS1 RNA-binding domain0.0000224Direct
F1F0 ATP synthase subunit C0.0000224Direct
Ribosomal proteins S24e, L23 and L15e0.0000224Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00006239Direct
Translational machinery components0.00006344Direct
"Winged helix" DNA-binding domain0.0001392Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.0004553Direct
Nucleotidylyl transferase0.004641Inherited
Histone-fold0.02588Inherited
POZ domain0.02601Inherited
CCCH zinc finger0.02916Inherited
Translation proteins0.2317Inherited
Class II aaRS and biotin synthetases0.2317Inherited
Ribosomal protein S5 domain 2-like0.293Inherited
Protein kinase-like (PK-like)0.7834Inherited
SNARE-like0.7886Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000007844Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00000000007844Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.000004773Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.0000224Direct
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.00005163Direct
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.0001401Direct
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.0004553Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0004717Direct
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.005928Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.03648Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000007844Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.0004553Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)