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Worm Phenotype (WP): cell differentiation variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <4>
+ + 2:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ 1:   cell development variant [WBPhenotype:0000529] <17>(128|124) (129|49|15)
0:   cell differentiation variant [WBPhenotype:0000354] <2>(6|6) (6|4|0)
- 1:   HSN differentiation precocious [WBPhenotype:0000355](0|0) (0|0|0)
- 1:   gonad independent vulva differentiation [WBPhenotype:0002027](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
ValRS/IleRS/LeuRS editing domain0Direct
Class II aaRS and biotin synthetases0.000000000001045Direct
Nucleotidylyl transferase0.00000000000353Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00000000003434Direct
Class II aaRS ABD-related0.00004629Direct
Nucleic acid-binding proteins0.0007378Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
ValRS/IleRS/LeuRS editing domain0Direct
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.0000000000001536Direct
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.0000000000006452Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.0000000006165Direct
Anticodon-binding domain0.00000000959Direct
Anticodon-binding domain of Class II aaRS0.000002421Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ValRS/IleRS/LeuRS editing domain0Direct
Class II aaRS and biotin synthetases0.0000000000008286Direct
Nucleotidylyl transferase0.000000000002805Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00000000002734Direct
Class II aaRS ABD-related0.00003813Direct
Nucleic acid-binding proteins0.0006168Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50677,52374
  • 50677 - ValRS/IleRS/LeuRS editing domain
  • 52374 - Nucleotidylyl transferase
  • 0Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.00000003155Direct
    55681,52954
  • 55681 - Class II aaRS and biotin synthetases
  • 52954 - Class II aaRS ABD-related
  • 0.000002838Direct
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.00001338Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)