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Worm Phenotype (WP): avoids bacterial lawn

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   behavior variant [WBPhenotype:0000517] <2>(133|132) (135|53|20)
+ + 2:   organism behavior variant [WBPhenotype:0000525] <21>(133|132) (135|53|20)
+ 1:   feeding behavior variant [WBPhenotype:0000659] <9>(34|32) (36|12|4)
0:   avoids bacterial lawn [WBPhenotype:0000402](24|18) (24|10|4)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Histone-fold4.451e-16Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000001606Direct
Translation proteins SH3-like domain0.000000002871Direct
GroEL-intermediate domain like0.00000000653Direct
GroEL equatorial domain-like0.00000000653Direct
Sm-like ribonucleoproteins0.000000008108Direct
GroEL apical domain-like0.00000002088Direct
Nucleotidylyl transferase0.00000002379Direct
Class II aaRS and biotin synthetases0.00000002604Direct
Zn-binding ribosomal proteins0.00000003801Direct
S15/NS1 RNA-binding domain0.0000001623Direct
Class II aaRS ABD-related0.000007762Direct
Actin-like ATPase domain0.00001035Direct
F1F0 ATP synthase subunit C0.00002114Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00005565Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.0000598Direct
Lipovitellin-phosvitin complex, superhelical domain0.0000598Direct
Tubulin nucleotide-binding domain-like0.0004227Direct
Thiamin diphosphate-binding fold (THDP-binding)0.0004289Direct
L30e-like0.0004289Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0004289Direct
Nucleic acid-binding proteins0.0005323Direct
Tubulin C-terminal domain-like0.0005735Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0006795Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Anticodon-binding domain of Class II aaRS0Direct
a tRNA synthase domain0Direct
Nucleosome core histones6.242e-16Direct
Proteasome subunits0.000000000000006229Direct
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.00000003418Direct
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.00000003418Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000003518Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.0000007626Direct
Group II chaperonin (CCT, TRIC), apical domain0.000001001Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.00000743Direct
Actin/HSP700.000008923Direct
L30e/L7ae ribosomal proteins0.00003477Direct
F1F0 ATP synthase subunit C0.00003477Direct
RecA protein-like (ATPase-domain)0.00009811Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00009811Direct
Lipovitellin-phosvitin complex, superhelical domain0.00009811Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0004081Direct
Tubulin, GTPase domain0.0008038Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Histone-fold3.509e-16Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000001281Direct
Translation proteins SH3-like domain0.0000000023Direct
GroEL equatorial domain-like0.000000005238Direct
GroEL-intermediate domain like0.000000005238Direct
Sm-like ribonucleoproteins0.000000006506Direct
GroEL apical domain-like0.0000000168Direct
Nucleotidylyl transferase0.00000001915Direct
Class II aaRS and biotin synthetases0.00000002096Direct
Zn-binding ribosomal proteins0.00000003062Direct
S15/NS1 RNA-binding domain0.0000001311Direct
Class II aaRS ABD-related0.000006345Direct
Actin-like ATPase domain0.000008467Direct
F1F0 ATP synthase subunit C0.00001734Direct
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.00004585Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00004927Direct
Lipovitellin-phosvitin complex, superhelical domain0.00004927Direct
Tubulin nucleotide-binding domain-like0.0003509Direct
Thiamin diphosphate-binding fold (THDP-binding)0.0003561Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0003561Direct
L30e-like0.0003561Direct
Nucleic acid-binding proteins0.0004429Direct
Tubulin C-terminal domain-like0.0004776Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0005673Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.000000005238Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000000005238Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.000002286Direct
    55681,52954
  • 55681 - Class II aaRS and biotin synthetases
  • 52954 - Class II aaRS ABD-related
  • 0.000003686Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.000003686Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.00004927Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0.00004927Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0002078Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0003509Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003561Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000000005238Direct
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.00004927Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0002078Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003561Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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