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Worm Phenotype (WP): neuronal outgrowth variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + 2:   cell development variant [WBPhenotype:0000529] <17>(128|124) (129|49|15)
+ 1:   neuron development variant [WBPhenotype:0000816] <6>(30|27) (30|10|4)
0:   neuronal outgrowth variant [WBPhenotype:0000572] <4>(21|17) (21|7|4)
- 1:   axon outgrowth variant [WBPhenotype:0001224] <7>(19|15) (19|7|4)
- 1:   anterior posterior neurite growth variant [WBPhenotype:0002393] <1>(0|0) (0|0|0)
- 1:   ectopic neurite outgrowth [WBPhenotype:0002491] <1>(0|0) (0|0|0)
- 1:   excess neurite outgrowth [WBPhenotype:0000629] <1>(0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Sema domain0.0000000005234Direct
Frizzled cysteine-rich domain0.00000002242Direct
Tubulin nucleotide-binding domain-like0.000003102Direct
Tubulin C-terminal domain-like0.000004663Direct
Plexin repeat0.00001285Direct
Cysteine-rich domain0.0002705Direct
Protein kinase-like (PK-like)0.0006338Direct
Growth factor receptor domain0.0007656Direct
BAR/IMD domain-like0.000912Direct
GTPase activation domain, GAP0.001084Inherited
Calponin-homology domain, CH-domain0.001268Inherited
SMAD/FHA domain0.0043Inherited
Fibronectin type III0.01062Inherited
Immunoglobulin0.01502Inherited
PH domain-like0.0167Inherited
EGF/Laminin0.04101Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.04101Inherited
SAM/Pointed domain0.1117Inherited
Cadherin-like0.419Inherited
Concanavalin A-like lectins/glucanases0.4963Inherited
P-loop containing nucleoside triphosphate hydrolases1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0.00000005192Direct
Sema domain0.00000005192Direct
Laminin G-like module0.0000005929Direct
Tubulin, GTPase domain0.000008668Direct
Tubulin, C-terminal domain0.00001296Direct
Plexin repeat0.00002366Direct
Protein kinases, catalytic subunit0.0005043Direct
PDZ domain0.0005883Direct
FHA domain0.0008584Direct
Growth factor receptor domain0.001527Inherited
BCR-homology GTPase activation domain (BH-domain)0.002502Inherited
Calponin-homology domain, CH-domain0.00269Inherited
Fibronectin type III0.008773Inherited
Pleckstrin-homology domain (PH domain)0.03513Inherited
Motor proteins0.05385Inherited
I set domains0.08258Inherited
Cadherin0.3941Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sema domain0.0000000004181Direct
Frizzled cysteine-rich domain0.00000001805Direct
Tubulin nucleotide-binding domain-like0.000002537Direct
Tubulin C-terminal domain-like0.000003813Direct
Plexin repeat0.00001052Direct
Cysteine-rich domain0.000224Direct
Protein kinase-like (PK-like)0.0005286Direct
Growth factor receptor domain0.0006403Direct
BAR/IMD domain-like0.0007638Direct
GTPase activation domain, GAP0.0009089Direct
Calponin-homology domain, CH-domain0.001064Inherited
SMAD/FHA domain0.003657Inherited
Fibronectin type III0.00915Inherited
Immunoglobulin0.01299Inherited
PH domain-like0.01447Inherited
EGF/Laminin0.03625Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.03625Inherited
SAM/Pointed domain0.1012Inherited
Cadherin-like0.3977Inherited
Concanavalin A-like lectins/glucanases0.4743Inherited
P-loop containing nucleoside triphosphate hydrolases1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0.000000764Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.000002537Direct
    81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.003657Inherited
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.03625Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.1364Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.1676Inherited
    49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.1676Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    81296,81296,81296
  • 81296 - E set domains
  • 81296 - E set domains
  • 81296 - E set domains
  • 0.000000764Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.1012Inherited
    49313,49313,49313
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 49313 - Cadherin-like
  • 0.1676Inherited
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.1915Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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