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Worm Phenotype (WP): cell migration variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   behavior variant [WBPhenotype:0000517] <2>(133|132) (134|53|20)
+ + + 3:   Variant [WBPhenotype:0000886] <4>
+ + 2:   organism behavior variant [WBPhenotype:0000525] <21>(133|132) (134|53|20)
+ + 2:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ 1:   cell development variant [WBPhenotype:0000529] <17>(128|124) (129|49|15)
+ 1:   locomotion variant [WBPhenotype:0000643] <9>(74|80) (74|32|15)
+ 1:   movement variant [WBPhenotype:0001206] <9>(65|65) (65|25|9)
0:   cell migration variant [WBPhenotype:0000594] <6>(24|25) (24|6|1)
- 1:   neuron migration variant [WBPhenotype:0001140] <3>(15|14) (15|3|0)
- 1:   distal tip cell migration variant [WBPhenotype:0000195] <2>(3|3) (3|1|0)
- 1:   anterior cell migration defective [WBPhenotype:0001230] <1>(0|0) (0|0|0)
- 1:   posterior cell migration variant [WBPhenotype:0001519] <1>(2|2) (2|0|0)
- 1:   cell migration failure [WBPhenotype:0000393](1|0) (1|0|0)
- 1:   linker cell migration variant [WBPhenotype:0001511](2|2) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
WWE domain0Direct
Integrin alpha N-terminal domain0Direct
Frizzled cysteine-rich domain0Direct
RING/U-box0Direct
Skp1 dimerisation domain-like0.000000000001097Direct
UBC-like0.00000000000264Direct
Hect, E3 ligase catalytic domain0.00000000002639Direct
Cysteine proteinases0.0000000001961Direct
B-box zinc-binding domain0.000000007579Direct
Integrin domains0.00003545Direct
EGF/Laminin0.00007388Direct
PapD-like0.0001199Direct
Smc hinge domain0.00014Direct
Immunoglobulin0.0005427Direct
Second domain of FERM0.0007381Direct
Tubulin C-terminal domain-like0.001077Inherited
POZ domain0.001624Inherited
NHL repeat0.00319Inherited
Tubulin nucleotide-binding domain-like0.003583Inherited
UBA-like0.01118Inherited
PX domain0.01267Inherited
RCC1/BLIP-II0.02975Inherited
BAR/IMD domain-like0.2713Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.6037Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Frizzled cysteine-rich domain0Direct
RING finger domain, C3HC40Direct
Laminin-type module0Direct
Integrin domains0Direct
Smc hinge domain0Direct
WWE domain0Direct
UBC-related0.000000000000004077Direct
Ubiquitin carboxyl-terminal hydrolase, UCH0.0000000000003668Direct
Skp1 dimerisation domain-like0.0000000000003668Direct
Hect, E3 ligase catalytic domain0.00000000005367Direct
B-box zinc-binding domain0.000000003371Direct
BTB/POZ domain0.0000001866Direct
MSP-like0.00003782Direct
I set domains0.0003874Direct
NHL repeat0.0004351Direct
Reprolysin-like0.0004351Direct
Third domain of FERM0.0004774Direct
First domain of FERM0.0005205Direct
Tubulin, C-terminal domain0.0006278Direct
Second domain of FERM0.00072Direct
Fibronectin type III0.0008301Direct
Tubulin, GTPase domain0.002215Inherited
Ubiquitin carboxyl-terminal hydrolase UCH-L0.002245Inherited
Myotubularin-like phosphatases0.008922Inherited
PX domain0.01082Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
WWE domain0Direct
Frizzled cysteine-rich domain0Direct
RING/U-box0Direct
Integrin alpha N-terminal domain0Direct
Skp1 dimerisation domain-like0.00000000000087Direct
UBC-like0.000000000002097Direct
Hect, E3 ligase catalytic domain0.00000000002101Direct
Cysteine proteinases0.0000000001564Direct
B-box zinc-binding domain0.000000006082Direct
Integrin domains0.00002915Direct
EGF/Laminin0.0000609Direct
PapD-like0.00009907Direct
Smc hinge domain0.0001156Direct
Immunoglobulin0.0004517Direct
Second domain of FERM0.000617Direct
Tubulin C-terminal domain-like0.0009028Direct
POZ domain0.001366Inherited
NHL repeat0.002703Inherited
Tubulin nucleotide-binding domain-like0.003041Inherited
UBA-like0.009631Inherited
PX domain0.01094Inherited
RCC1/BLIP-II0.02611Inherited
BAR/IMD domain-like0.2529Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.5814Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57850,117839
  • 57850 - RING/U-box
  • 117839 - WWE domain
  • 0Direct
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.000000000004372Direct
    57850,57845
  • 57850 - RING/U-box
  • 57845 - B-box zinc-binding domain
  • 0.0000000009611Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0001115Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.0005767Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.003041Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0008376Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)