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Worm Phenotype (WP): cell migration variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + 3:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + 2:   development variant [WBPhenotype:0000518] <6>(508|585) (508|248|68)
+ 1:   cell development variant [WBPhenotype:0000529] <17>(119|124) (119|47|12)
0:   cell migration variant [WBPhenotype:0000594] <6>(24|23) (24|5|1)
- 1:   neuron migration variant [WBPhenotype:0001140] <3>(15|14) (15|3|0)
- 1:   distal tip cell migration variant [WBPhenotype:0000195] <2>(3|3) (3|1|0)
- 1:   anterior cell migration defective [WBPhenotype:0001230] <1>(0|0) (0|0|0)
- 1:   posterior cell migration variant [WBPhenotype:0001519] <1>(2|2) (2|0|0)
- 1:   cell migration failure [WBPhenotype:0000393](1|0) (1|0|0)
- 1:   linker cell migration variant [WBPhenotype:0001511](2|2) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
UBC-like0Direct
WWE domain0Direct
RING/U-box0Direct
Frizzled cysteine-rich domain0Direct
Integrin alpha N-terminal domain0Direct
Hect, E3 ligase catalytic domain0.00000000003002Direct
Cysteine proteinases0.0000000001857Direct
Skp1 dimerisation domain-like0.000000001071Direct
B-box zinc-binding domain0.0000006044Direct
Integrin domains0.00003745Direct
PapD-like0.0001423Direct
Tubulin C-terminal domain-like0.0006085Direct
EGF/Laminin0.0006953Direct
Second domain of FERM0.0007937Direct
Immunoglobulin0.0009129Direct
Smc hinge domain0.001163Inherited
Tubulin nucleotide-binding domain-like0.001871Inherited
UBA-like0.005362Inherited
POZ domain0.01008Inherited
NHL repeat0.01616Inherited
PX domain0.04523Inherited
RCC1/BLIP-II0.0967Inherited
BAR/IMD domain-like0.2523Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.6309Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Laminin-type module0Direct
UBC-related0Direct
WWE domain0Direct
Smc hinge domain0Direct
RING finger domain, C3HC40Direct
Frizzled cysteine-rich domain0Direct
Integrin domains0Direct
Ubiquitin carboxyl-terminal hydrolase, UCH0.00000000003449Direct
Hect, E3 ligase catalytic domain0.00000000006237Direct
Skp1 dimerisation domain-like0.0000000005097Direct
B-box zinc-binding domain0.0000003395Direct
Ubiquitin carboxyl-terminal hydrolase UCH-L0.00004433Direct
MSP-like0.00004691Direct
BTB/POZ domain0.00005399Direct
Tubulin, C-terminal domain0.0003932Direct
Third domain of FERM0.000513Direct
First domain of FERM0.0005517Direct
Second domain of FERM0.0007827Direct
Tubulin, GTPase domain0.001257Inherited
I set domains0.001406Inherited
NHL repeat0.002782Inherited
Myotubularin-like phosphatases0.009737Inherited
PX domain0.03529Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
RING/U-box0Direct
Integrin alpha N-terminal domain0Direct
UBC-like0Direct
Frizzled cysteine-rich domain0Direct
WWE domain0Direct
Hect, E3 ligase catalytic domain0.00000000002372Direct
Cysteine proteinases0.0000000001471Direct
Skp1 dimerisation domain-like0.0000000008503Direct
B-box zinc-binding domain0.0000004875Direct
Integrin domains0.00003059Direct
PapD-like0.0001167Direct
Tubulin C-terminal domain-like0.0005041Direct
EGF/Laminin0.0005768Direct
Second domain of FERM0.00066Direct
Immunoglobulin0.0007595Direct
Smc hinge domain0.0009692Direct
Tubulin nucleotide-binding domain-like0.001567Inherited
UBA-like0.004558Inherited
POZ domain0.008664Inherited
NHL repeat0.01402Inherited
PX domain0.03997Inherited
RCC1/BLIP-II0.08725Inherited
BAR/IMD domain-like0.2344Inherited
Glucocorticoid receptor-like (DNA-binding domain)0.609Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57850,117839
  • 57850 - RING/U-box
  • 117839 - WWE domain
  • 0Direct
    57850,57845
  • 57850 - RING/U-box
  • 57845 - B-box zinc-binding domain
  • 0.000000001095Direct
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.000000002948Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0001195Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.001567Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0008867Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)