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Worm Phenotype (WP): nervous system morphology variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <4>
+ + 2:   morphology variant [WBPhenotype:0000520] <9>(440|519) (440|228|63)
+ 1:   organ system morphology variant [WBPhenotype:0000534] <9>(98|101) (99|48|16)
0:   nervous system morphology variant [WBPhenotype:0000604] <7>(30|26) (30|10|3)
- 1:   sensillum morphology variant [WBPhenotype:0000299] <11>(17|13) (17|6|0)
- 1:   neuron morphology variant [WBPhenotype:0000905] <5>(14|9) (14|5|2)
- 1:   synapse morphology variant [WBPhenotype:0000616] <2>(4|4) (4|3|1)
- 1:   male nervous system morphology variant [WBPhenotype:0001358] <1>(6|6) (6|1|0)
- 1:   neuron number variant [WBPhenotype:0001312](0|0) (0|0|0)
- 1:   neuron positioning variant [WBPhenotype:0001310](0|0) (0|0|0)
- 1:   synapse density variant [WBPhenotype:0002001](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SMAD MH1 domain0.0000002182Direct
Sema domain0.0000002182Direct
Arginase/deacetylase0.000000435Direct
Transducin (alpha subunit), insertion domain0.000001063Direct
GTPase activation domain, GAP0.00001064Direct
Homeodomain-like0.00001845Direct
Immunoglobulin0.00005599Direct
SMAD/FHA domain0.00005814Direct
PYP-like sensor domain (PAS domain)0.001341Inherited
Fibronectin type III0.002468Inherited
BAR/IMD domain-like0.003794Inherited
Concanavalin A-like lectins/glucanases0.01007Inherited
Frizzled cysteine-rich domain0.02778Inherited
PX domain0.02778Inherited
PDZ domain-like0.03278Inherited
Plexin repeat0.0388Inherited
Bet v1-like0.0388Inherited
Tubulin nucleotide-binding domain-like0.04101Inherited
Bromodomain0.04255Inherited
Tubulin C-terminal domain-like0.07114Inherited
Glutathione synthetase ATP-binding domain-like0.07805Inherited
HMG-box0.08447Inherited
TPR-like0.1015Inherited
EGF/Laminin0.1465Inherited
Cysteine-rich domain0.1841Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.191Inherited
SNARE-like0.2435Inherited
P-loop containing nucleoside triphosphate hydrolases0.254Inherited
PH domain-like0.2917Inherited
C-type lectin-like1Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Sema domain0Direct
SMAD domain0.0000002961Direct
Histone deacetylase, HDAC0.0000002961Direct
SMAD MH1 domain0.0000005159Direct
Transducin (alpha subunit), insertion domain0.000001056Direct
Motor proteins0.000004307Direct
Homeodomain0.00001052Direct
BCR-homology GTPase activation domain (BH-domain)0.0001016Direct
Transforming growth factor (TGF)-beta0.0003586Direct
DEP domain0.0003586Direct
PDEase0.0009721Direct
Fibronectin type III0.002364Inherited
Laminin G-like module0.009104Inherited
I set domains0.01978Inherited
Frizzled cysteine-rich domain0.02497Inherited
FHA domain0.02518Inherited
Plexin repeat0.03569Inherited
PDZ domain0.03695Inherited
Tubulin, GTPase domain0.03905Inherited
Bromodomain0.03967Inherited
Tubulin, C-terminal domain0.06814Inherited
HMG-box0.07975Inherited
Clathrin coat assembly domain0.0822Inherited
Pleckstrin-homology domain (PH domain)0.2155Inherited
WD40-repeat1Inherited
C-type lectin domain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sema domain0.0000001766Direct
SMAD MH1 domain0.0000001766Direct
Arginase/deacetylase0.0000003526Direct
Transducin (alpha subunit), insertion domain0.0000008651Direct
GTPase activation domain, GAP0.000008705Direct
Homeodomain-like0.00001513Direct
Immunoglobulin0.00004614Direct
SMAD/FHA domain0.00004791Direct
PYP-like sensor domain (PAS domain)0.001125Inherited
Fibronectin type III0.002086Inherited
BAR/IMD domain-like0.003223Inherited
Concanavalin A-like lectins/glucanases0.008674Inherited
PX domain0.02434Inherited
Frizzled cysteine-rich domain0.02434Inherited
PDZ domain-like0.02883Inherited
Plexin repeat0.03426Inherited
Bet v1-like0.03426Inherited
Tubulin nucleotide-binding domain-like0.03626Inherited
Bromodomain0.03763Inherited
Tubulin C-terminal domain-like0.06363Inherited
Glutathione synthetase ATP-binding domain-like0.07005Inherited
HMG-box0.07593Inherited
TPR-like0.09167Inherited
EGF/Laminin0.1339Inherited
Cysteine-rich domain0.1692Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.1757Inherited
SNARE-like0.226Inherited
P-loop containing nucleoside triphosphate hydrolases0.2363Inherited
PH domain-like0.2727Inherited
C-type lectin-like1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000008651Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.0002449Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0075Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.008674Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.02434Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.03626Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.1005Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.3036Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.3713Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000408Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.03403Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.08028Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)