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Worm Phenotype (WP): nervous system morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <2>
+ + 2:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ 1:   organ system morphology variant [WBPhenotype:0000534] <9>(99|104) (101|47|17)
0:   nervous system morphology variant [WBPhenotype:0000604] <8>(31|28) (33|10|4)
- 1:   sensillum morphology variant [WBPhenotype:0000299] <8>(17|15) (19|7|1)
- 1:   neuron morphology variant [WBPhenotype:0000905] <5>(13|8) (14|5|2)
- 1:   synapse morphology variant [WBPhenotype:0000616] <2>(6|5) (6|2|1)
- 1:   accessory cell morphology variant [WBPhenotype:0000969] <1>(0|0) (0|0|0)
- 1:   male nervous system morphology variant [WBPhenotype:0001358] <1>(6|6) (6|1|0)
- 1:   neuron positioning variant [WBPhenotype:0001310] <1>(1|1) (1|0|0)
- 1:   neuron number variant [WBPhenotype:0001312](0|0) (0|0|0)
- 1:   synapse density variant [WBPhenotype:0002001](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Sema domain0.0000002743Direct
SMAD MH1 domain0.0000002743Direct
Arginase/deacetylase0.0000005635Direct
Transducin (alpha subunit), insertion domain0.000001481Direct
Homeodomain-like0.000004174Direct
GTPase activation domain, GAP0.00001476Direct
SMAD/FHA domain0.00007186Direct
Immunoglobulin0.00007864Direct
PYP-like sensor domain (PAS domain)0.001551Inherited
Fibronectin type III0.003074Inherited
BAR/IMD domain-like0.004465Inherited
Cystine-knot cytokines0.01161Inherited
Concanavalin A-like lectins/glucanases0.01215Inherited
PDZ domain-like0.02156Inherited
PX domain0.0302Inherited
Frizzled cysteine-rich domain0.0302Inherited
Plexin repeat0.04283Inherited
Tubulin nucleotide-binding domain-like0.04674Inherited
Bromodomain0.0474Inherited
SAM/Pointed domain0.0474Inherited
Tubulin C-terminal domain-like0.08004Inherited
Glutathione synthetase ATP-binding domain-like0.0868Inherited
HMG-box0.09301Inherited
TPR-like0.1497Inherited
EGF/Laminin0.1658Inherited
Cysteine-rich domain0.2013Inherited
P-loop containing nucleoside triphosphate hydrolases0.2349Inherited
SNARE-like0.26Inherited
PH domain-like0.334Inherited
ARM repeat0.7901Inherited
C-type lectin-like1Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Sema domain0Direct
SMAD domain0.0000003646Direct
Histone deacetylase, HDAC0.0000003646Direct
SMAD MH1 domain0.0000006173Direct
Transducin (alpha subunit), insertion domain0.000001378Direct
Homeodomain0.000001626Direct
Motor proteins0.00000572Direct
BCR-homology GTPase activation domain (BH-domain)0.0001245Direct
Transforming growth factor (TGF)-beta0.0004016Direct
DEP domain0.0004016Direct
Protein kinases, catalytic subunit0.001459Inherited
G proteins0.001878Inherited
Fibronectin type III0.002817Inherited
Laminin G-like module0.009864Inherited
PDZ domain0.02195Inherited
I set domains0.02222Inherited
Frizzled cysteine-rich domain0.02666Inherited
FHA domain0.02776Inherited
Plexin repeat0.0385Inherited
Bromodomain0.04314Inherited
Tubulin, GTPase domain0.04323Inherited
Tubulin, C-terminal domain0.07486Inherited
HMG-box0.08606Inherited
Clathrin coat assembly domain0.08708Inherited
Armadillo repeat0.1765Inherited
Pleckstrin-homology domain (PH domain)0.2338Inherited
WD40-repeat0.9958Inherited
C-type lectin domain1Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sema domain0.0000002205Direct
SMAD MH1 domain0.0000002205Direct
Arginase/deacetylase0.0000004543Direct
Transducin (alpha subunit), insertion domain0.000001198Direct
Homeodomain-like0.000003391Direct
GTPase activation domain, GAP0.00001202Direct
SMAD/FHA domain0.00005879Direct
Immunoglobulin0.00006436Direct
PYP-like sensor domain (PAS domain)0.001296Inherited
Fibronectin type III0.002595Inherited
BAR/IMD domain-like0.003789Inherited
Cystine-knot cytokines0.01Inherited
Concanavalin A-like lectins/glucanases0.01048Inherited
PDZ domain-like0.01878Inherited
Frizzled cysteine-rich domain0.02651Inherited
PX domain0.02651Inherited
Plexin repeat0.03782Inherited
Bet v1-like0.03782Inherited
Tubulin nucleotide-binding domain-like0.04134Inherited
Bromodomain0.04194Inherited
SAM/Pointed domain0.04194Inherited
Tubulin C-terminal domain-like0.07181Inherited
Glutathione synthetase ATP-binding domain-like0.07803Inherited
HMG-box0.0838Inherited
TPR-like0.1365Inherited
EGF/Laminin0.1518Inherited
Cysteine-rich domain0.1854Inherited
C2 domain (Calcium/lipid-binding domain, CaLB)0.1951Inherited
P-loop containing nucleoside triphosphate hydrolases0.2175Inherited
SNARE-like0.242Inherited
PH domain-like0.3144Inherited
ARM repeat0.7715Inherited
C-type lectin-like1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
101912,103575
  • 101912 - Sema domain
  • 103575 - Plexin repeat
  • 0Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.000001198Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.00029Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.008679Inherited
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.01048Inherited
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.02651Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.04134Inherited
    47413,46689
  • 47413 - lambda repressor-like DNA-binding domains
  • 46689 - Homeodomain-like
  • 0.08624Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.1126Inherited
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.3896Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    52540,52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00004707Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.03924Inherited
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.08755Inherited
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.1742Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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