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Worm Phenotype (WP): positive chemotaxis variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   Variant [WBPhenotype:0000886] <4>
+ + + + + + + 7:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + + + 6:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
+ + + + + 5:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(346|406) (348|189|55)
+ + + + 4:   behavior variant [WBPhenotype:0000517] <2>(133|132) (134|53|20)
+ + + + 4:   organism environmental stimulus response variant [WBPhenotype:0000738] <16>(115|103) (118|51|16)
+ + + 3:   organism behavior variant [WBPhenotype:0000525] <21>(133|132) (134|53|20)
+ + + 3:   chemosensory behavior variant [WBPhenotype:0001049] <3>(20|20) (20|5|0)
+ + + 3:   chemical response variant [WBPhenotype:0000523] <11>(65|58) (66|25|6)
+ + 2:   chemosensory response variant [WBPhenotype:0001040] <3>(20|20) (20|5|0)
+ + 2:   movement variant [WBPhenotype:0001206] <9>(65|65) (65|25|9)
+ + 2:   locomotion variant [WBPhenotype:0000643] <9>(74|80) (74|32|15)
+ 1:   chemotaxis variant [WBPhenotype:0001434] <2>(20|19) (20|5|0)
0:   positive chemotaxis variant [WBPhenotype:0000635] <3>(13|13) (13|4|0)
- 1:   aqueous positive chemotaxis variant [WBPhenotype:0001047] <8>(8|8) (8|3|0)
- 1:   odorant positive chemotaxis variant [WBPhenotype:0000265] <8>(6|6) (6|1|0)
- 1:   positive chemotaxis defective [WBPhenotype:0000015] <4>(8|6) (8|3|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleotide cyclase0Direct
cAMP-binding domain-like0.00000009601Direct
Protein kinase-like (PK-like)0.00003099Direct
Cysteine-rich domain0.0003349Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0009063Direct
Periplasmic binding protein-like I0.001075Inherited
Nicotinic receptor ligand binding domain-like0.001882Inherited
PH domain-like0.06178Inherited
TPR-like0.07153Inherited
Periplasmic binding protein-like II0.2118Inherited
Multidrug efflux transporter AcrB transmembrane domain0.2118Inherited
Voltage-gated potassium channels0.2933Inherited
HLH, helix-loop-helix DNA-binding domain0.3003Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Adenylyl and guanylyl cyclase catalytic domain0Direct
cAMP-binding domain0.00000017Direct
Protein kinases, catalytic subunit0.00006121Direct
PLC-like (P variant)0.00008464Direct
Pleckstrin-homology domain (PH domain)0.001129Inherited
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.001441Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.001981Inherited
Nicotinic receptor ligand binding domain-like0.003123Inherited
L-arabinose binding protein-like0.007766Inherited
Voltage-gated potassium channels0.2085Inherited
Multidrug efflux transporter AcrB transmembrane domain0.2085Inherited
Phosphate binding protein-like0.2085Inherited
HLH, helix-loop-helix DNA-binding domain0.2952Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nucleotide cyclase0Direct
cAMP-binding domain-like0.00000007749Direct
Protein kinase-like (PK-like)0.00002547Direct
Cysteine-rich domain0.0002778Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0007589Direct
Periplasmic binding protein-like I0.0009017Direct
Nicotinic receptor ligand binding domain-like0.001585Inherited
PH domain-like0.05506Inherited
TPR-like0.06399Inherited
Periplasmic binding protein-like II0.1956Inherited
Multidrug efflux transporter AcrB transmembrane domain0.1956Inherited
Voltage-gated potassium channels0.2742Inherited
HLH, helix-loop-helix DNA-binding domain0.2809Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
56112,55073
  • 56112 - Protein kinase-like (PK-like)
  • 55073 - Nucleotide cyclase
  • 0Direct
    50978,50978
  • 50978 - WD40 repeat-like
  • 50978 - WD40 repeat-like
  • 0.00007609Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.0007589Direct
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.2809Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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