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Worm Phenotype (WP): gonad development variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + 2:   organ system development variant [WBPhenotype:0000530] <10>(78|72) (80|31|12)
+ 1:   reproductive system development variant [WBPhenotype:0000624] <10>(47|39) (48|20|8)
0:   gonad development variant [WBPhenotype:0000691] <2>(18|15) (19|8|3)
- 1:   somatic gonad development variant [WBPhenotype:0000399] <12>(15|13) (16|6|1)
- 1:   male gonad development variant [WBPhenotype:0001675] <3>(6|5) (6|3|1)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
P-loop containing nucleoside triphosphate hydrolases0.000007988Direct
Cdc48 domain 2-like0.000008004Direct
ADC-like0.000008004Direct
GroEL equatorial domain-like0.00003335Direct
GroEL-intermediate domain like0.00003335Direct
F1F0 ATP synthase subunit C0.00003721Direct
GroEL apical domain-like0.00006321Direct
Acyl-CoA N-acyltransferases (Nat)0.001247Inherited
TPR-like0.001357Inherited
Nucleic acid-binding proteins0.002471Inherited
Tubulin nucleotide-binding domain-like0.007282Inherited
Tubulin C-terminal domain-like0.009069Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.02576Inherited
SNARE-like0.141Inherited
Cyclin-like0.1499Inherited
Bromodomain0.598Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0.000003465Direct
Cdc48 N-terminal domain-like0.0000124Direct
Cdc48 domain 2-like0.0000124Direct
N-acetyl transferase, NAT0.00001667Direct
F1F0 ATP synthase subunit C0.00005764Direct
RecA protein-like (ATPase-domain)0.0001614Direct
Clathrin adaptor core protein0.0003528Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0006632Direct
Group II chaperonin (CCT, TRIC), apical domain0.001124Inherited
Tubulin, GTPase domain0.01107Inherited
Tubulin, C-terminal domain0.01378Inherited
Proteasome subunits0.02283Inherited
Bromodomain0.5845Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
P-loop containing nucleoside triphosphate hydrolases0.000006534Direct
ADC-like0.000006548Direct
Cdc48 domain 2-like0.000006548Direct
GroEL-intermediate domain like0.00002741Direct
GroEL equatorial domain-like0.00002741Direct
F1F0 ATP synthase subunit C0.0000306Direct
GroEL apical domain-like0.00005209Direct
Acyl-CoA N-acyltransferases (Nat)0.001046Inherited
TPR-like0.001138Inherited
Nucleic acid-binding proteins0.002089Inherited
Tubulin nucleotide-binding domain-like0.006239Inherited
Tubulin C-terminal domain-like0.007797Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.02253Inherited
SNARE-like0.1287Inherited
Cyclin-like0.137Inherited
Chromo domain-like0.2141Inherited
Bromodomain0.5758Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.000006548Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00002741Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00002741Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.006239Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.02253Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00002741Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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