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Worm Phenotype (WP): vulva morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + 3:   organ system morphology variant [WBPhenotype:0000534] <9>(99|104) (101|47|17)
+ + 2:   reproductive system morphology variant [WBPhenotype:0000605] <5>(49|49) (50|17|6)
+ 1:   hermaphrodite reproductive system morphology variant [WBPhenotype:0001335] <3>(22|22) (24|7|2)
0:   vulva morphology variant [WBPhenotype:0000695] <5>(22|22) (24|7|2)
- 1:   vulval invagination variant L4 [WBPhenotype:0000510] <1>(2|0) (2|0|0)
- 1:   bivulva [WBPhenotype:0002011](0|0) (0|0|0)
- 1:   everted vulva [WBPhenotype:0000696](2|3) (2|1|0)
- 1:   protruding vulva [WBPhenotype:0000697](14|14) (14|5|2)
- 1:   protrusion at vulval region [WBPhenotype:0001096](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0Direct
Nop domain0Direct
"Winged helix" DNA-binding domain0.0000001506Direct
RNA-binding domain, RBD0.0000003454Direct
WD40 repeat-like0.0000006198Direct
GroEL-intermediate domain like0.000001443Direct
GroEL equatorial domain-like0.000001443Direct
GroEL apical domain-like0.000004391Direct
HMG-box0.000006438Direct
Prefoldin0.00001428Direct
ARM repeat0.00003686Direct
GINS helical bundle-like0.0000987Direct
S-adenosylmethionine synthetase0.0000987Direct
Activating enzymes of the ubiquitin-like proteins0.0003244Direct
Ribosomal proteins S24e, L23 and L15e0.0004354Direct
Subtilisin-like0.0004354Direct
Smc hinge domain0.00117Inherited
TAZ domain0.00117Inherited
beta-beta-alpha zinc fingers0.002145Inherited
Nucleotide-diphospho-sugar transferases0.3473Inherited
Histone-fold1Inherited
NAD(P)-binding Rossmann-fold domains1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nop domain0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000009238Direct
Canonical RBD0.000001949Direct
Tandem AAA-ATPase domain0.000003092Direct
Group II chaperonin (CCT, TRIC), apical domain0.00000374Direct
WD40-repeat0.000007186Direct
HMG-box0.00002187Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0.00007808Direct
Proprotein convertase P-domain0.0001529Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.0001529Direct
MIF4G domain-like0.0001529Direct
S-adenosylmethionine synthetase0.0001529Direct
Prefoldin0.0002441Direct
I set domains0.0002998Direct
Nucleosome core histones0.0005762Direct
Forkhead DNA-binding domain0.0005867Direct
Ubiquitin activating enzymes (UBA)0.0006729Direct
Smc hinge domain0.0006729Direct
Subtilases0.0006729Direct
Actin/HSP700.001801Inherited
Chromo domain0.04255Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nop domain0Direct
Multidrug efflux transporter AcrB transmembrane domain0Direct
"Winged helix" DNA-binding domain0.0000001208Direct
RNA-binding domain, RBD0.000000278Direct
WD40 repeat-like0.0000005Direct
GroEL equatorial domain-like0.000001167Direct
GroEL-intermediate domain like0.000001167Direct
GroEL apical domain-like0.000003568Direct
HMG-box0.000005234Direct
Prefoldin0.00001164Direct
ARM repeat0.00003011Direct
GINS helical bundle-like0.00008085Direct
S-adenosylmethionine synthetase0.00008085Direct
Activating enzymes of the ubiquitin-like proteins0.0002673Direct
Ribosomal proteins S24e, L23 and L15e0.0003597Direct
Subtilisin-like0.0003597Direct
Nucleic acid-binding proteins0.0009695Direct
TAZ domain0.0009753Direct
Smc hinge domain0.0009753Direct
Chromo domain-like0.0009915Direct
beta-beta-alpha zinc fingers0.001801Inherited
Nucleotide-diphospho-sugar transferases0.3273Inherited
NAD(P)-binding Rossmann-fold domains1Inherited
Histone-fold1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.000001167Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000001167Direct
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.00008085Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.00008085Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0.00008085Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.0001103Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.001654Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000001167Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.00008085Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)