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Worm Phenotype (WP): protruding vulva

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <4>
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <9>(440|519) (440|228|63)
+ + + + 4:   organ system morphology variant [WBPhenotype:0000534] <9>(98|101) (99|48|16)
+ + + 3:   reproductive system morphology variant [WBPhenotype:0000605] <5>(49|49) (51|18|6)
+ + 2:   hermaphrodite reproductive system morphology variant [WBPhenotype:0001335] <3>(22|22) (25|8|2)
+ 1:   vulva morphology variant [WBPhenotype:0000695] <5>(22|22) (25|8|2)
0:   protruding vulva [WBPhenotype:0000697](14|14) (14|6|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Nop domain0Direct
GroEL equatorial domain-like0.0000005807Direct
GroEL-intermediate domain like0.0000005807Direct
GroEL apical domain-like0.000001784Direct
HMG-box0.000002127Direct
Prefoldin0.000006602Direct
Histone-fold0.00000949Direct
S-adenosylmethionine synthetase0.00005845Direct
GINS helical bundle-like0.00005845Direct
Activating enzymes of the ubiquitin-like proteins0.0001743Direct
Ribosomal proteins S24e, L23 and L15e0.0002624Direct
beta-beta-alpha zinc fingers0.0003946Direct
Smc hinge domain0.0007106Direct
TAZ domain0.0007106Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nop domain0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000003733Direct
Group II chaperonin (CCT, TRIC), apical domain0.00000153Direct
HMG-box0.000007458Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0.00004134Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.00009141Direct
S-adenosylmethionine synthetase0.00009141Direct
MIF4G domain-like0.00009141Direct
I set domains0.0001201Direct
Nucleosome core histones0.0001205Direct
Prefoldin0.000131Direct
Ubiquitin activating enzymes (UBA)0.0004076Direct
Smc hinge domain0.0004076Direct
Actin/HSP700.000765Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Nop domain0Direct
GroEL-intermediate domain like0.0000004712Direct
GroEL equatorial domain-like0.0000004712Direct
GroEL apical domain-like0.000001456Direct
HMG-box0.000001736Direct
Prefoldin0.000005401Direct
Histone-fold0.000007768Direct
GINS helical bundle-like0.00004815Direct
S-adenosylmethionine synthetase0.00004815Direct
Activating enzymes of the ubiquitin-like proteins0.0001439Direct
Ribosomal proteins S24e, L23 and L15e0.0002173Direct
beta-beta-alpha zinc fingers0.0003277Direct
TAZ domain0.0005937Direct
Smc hinge domain0.0005937Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000004712Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0000004712Direct
    49265,48726
  • 49265 - Fibronectin type III
  • 48726 - Immunoglobulin
  • 0.00004815Direct
    55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.00004815Direct
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.0008362Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.0008574Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000004712Direct
    55973,55973,55973
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 55973 - S-adenosylmethionine synthetase
  • 0.00004815Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)