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Worm Phenotype (WP): vulva development variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + 2:   organ system development variant [WBPhenotype:0000530] <10>(78|72) (80|31|12)
+ 1:   reproductive system development variant [WBPhenotype:0000624] <10>(47|39) (48|20|8)
0:   vulva development variant [WBPhenotype:0000699] <3>(17|13) (17|3|1)
- 1:   vulva cell fate specification variant [WBPhenotype:0000220] <2>(14|12) (14|3|1)
- 1:   vulval invagination variant L4 [WBPhenotype:0000510] <1>(2|0) (2|0|0)
- 1:   vulval development incomplete [WBPhenotype:0001262](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
E2F-DP heterodimerization region0.000002129Direct
Chromo domain-like0.000002602Direct
FYVE/PHD zinc finger0.00009151Direct
Sm-like ribonucleoproteins0.0001822Direct
Arginase/deacetylase0.000211Direct
HIT/MYND zinc finger-like0.001362Inherited
SET domain0.007197Inherited
RNA-binding domain, RBD0.01535Inherited
EGF/Laminin0.01587Inherited
Bromodomain0.01874Inherited
Nucleotide-diphospho-sugar transferases0.1239Inherited
Homeodomain-like0.1567Inherited
Protein kinase-like (PK-like)0.2825Inherited
HMG-box0.3728Inherited
"Winged helix" DNA-binding domain0.3985Inherited
WD40 repeat-like0.6148Inherited
NAD(P)-binding Rossmann-fold domains0.7592Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Cell cycle transcription factor e2f-dp0.000003193Direct
Histone deacetylase, HDAC0.0001823Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.0009124Direct
TBP-associated factors, TAFs0.001083Inherited
Chromo domain0.001503Inherited
PHD domain0.005046Inherited
Histone lysine methyltransferases0.005855Inherited
Bromodomain0.0157Inherited
PDZ domain0.02521Inherited
Pumilio repeat0.1141Inherited
Protein kinases, catalytic subunit0.2417Inherited
WD40-repeat0.4053Inherited
Homeodomain0.5203Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
E2F-DP heterodimerization region0.000001737Direct
Chromo domain-like0.000002125Direct
FYVE/PHD zinc finger0.0000755Direct
Sm-like ribonucleoproteins0.0001506Direct
Arginase/deacetylase0.0001745Direct
HIT/MYND zinc finger-like0.001143Inherited
SET domain0.006164Inherited
RNA-binding domain, RBD0.01328Inherited
EGF/Laminin0.01374Inherited
Bromodomain0.01629Inherited
Nucleotide-diphospho-sugar transferases0.1126Inherited
Homeodomain-like0.1434Inherited
Protein kinase-like (PK-like)0.2638Inherited
HMG-box0.3523Inherited
"Winged helix" DNA-binding domain0.3774Inherited
WD40 repeat-like0.5928Inherited
NAD(P)-binding Rossmann-fold domains0.7392Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.00005267Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.3868Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.3523Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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