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Worm Phenotype (WP): muscle cell attachment variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <26>(152|154) (153|66|17)
+ + 2:   blast cell physiology variant [WBPhenotype:0000985] <26>(152|154) (153|66|17)
+ 1:   muscle cell physiology variant [WBPhenotype:0000990] <7>(18|20) (19|12|4)
0:   muscle cell attachment variant [WBPhenotype:0000716](7|9) (8|8|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.0000000000000151Direct
Second domain of FERM0.0000001807Direct
GTPase activation domain, GAP0.000007011Direct
Cysteine-rich domain0.0001907Direct
DBL homology domain (DH-domain)0.0002219Direct
Actin-like ATPase domain0.0003278Direct
(Phosphotyrosine protein) phosphatases II0.0003682Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
SH2 domain0.0000000000003241Direct
LIM domain0.00000001009Direct
Second domain of FERM0.0000003445Direct
Third domain of FERM0.0000007061Direct
First domain of FERM0.000002633Direct
BCR-homology GTPase activation domain (BH-domain)0.00005757Direct
Actin/HSP700.00008926Direct
DBL homology domain (DH-domain)0.0004043Direct
I set domains0.0005025Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
SH2 domain0.00000000000001192Direct
Second domain of FERM0.0000001461Direct
GTPase activation domain, GAP0.000005736Direct
Cysteine-rich domain0.0001577Direct
DBL homology domain (DH-domain)0.0001836Direct
Actin-like ATPase domain0.0002719Direct
(Phosphotyrosine protein) phosphatases II0.0003055Direct
BAR/IMD domain-like0.000901Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.000000000002465Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.00000002155Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.0000000812Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.00000119Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.000002626Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.000002626Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.0001359Direct
    55550,56112
  • 55550 - SH2 domain
  • 56112 - Protein kinase-like (PK-like)
  • 0.0004394Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000000000637Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.0000007459Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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