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Worm Phenotype (WP): cell division variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <4>
+ + 2:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ 1:   blast cell physiology variant [WBPhenotype:0000985] <26>(152|154) (153|66|17)
+ 1:   cell physiology variant [WBPhenotype:0000536] <26>(152|154) (153|66|17)
0:   cell division variant [WBPhenotype:0000746] <20>(55|57) (55|24|4)
- 1:   meiosis defective early emb [WBPhenotype:0001041] <11>(38|34) (38|16|4)
- 1:   meiosis variant [WBPhenotype:0000775] <11>(38|34) (38|16|4)
- 1:   spindle variant [WBPhenotype:0002414] <8>(7|11) (7|5|0)
- 1:   mitosis variant [WBPhenotype:0001743] <6>(10|12) (10|4|1)
- 1:   cytokinesis variant [WBPhenotype:0002408] <5>(11|12) (11|2|0)
- 1:   cell cleavage variant [WBPhenotype:0000266] <2>(1|1) (1|1|0)
- 1:   cell division polarity variant [WBPhenotype:0001235] <2>(3|3) (3|0|0)
- 1:   VPC cell division variant [WBPhenotype:0000345] <1>(0|0) (0|0|0)
- 1:   anaphase variant [WBPhenotype:0002389] <1>(0|0) (0|0|0)
- 1:   cell division failure [WBPhenotype:0000417] <1>(0|0) (0|0|0)
- 1:   cell division precocious [WBPhenotype:0001495] <1>(0|0) (0|0|0)
- 1:   division axis defective [WBPhenotype:0001133] <1>(3|2) (3|2|0)
- 1:   cell division incomplete [WBPhenotype:0000371](0|0) (0|0|0)
- 1:   cell division slow [WBPhenotype:0000363](0|0) (0|0|0)
- 1:   cell division variant male [WBPhenotype:0001299](0|0) (0|0|0)
- 1:   metaphase variant [WBPhenotype:0002388](0|0) (0|0|0)
- 1:   multiple nuclei early emb [WBPhenotype:0001143](1|3) (1|1|0)
- 1:   pace of P lineage defective early emb [WBPhenotype:0000046](0|1) (0|0|0)
- 1:   sister cell division timing asynchrony reduced [WBPhenotype:0002369](2|1) (2|0|0)
- 1:   variable cell division timing [WBPhenotype:0002390](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Profilin (actin-binding protein)0Direct
Smc hinge domain0Direct
The spindle assembly checkpoint protein mad20Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Ribosomal protein L10Direct
Histone-fold0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
LEM domain0Direct
P-loop containing nucleoside triphosphate hydrolases0.0000161Direct
Frizzled cysteine-rich domain0.00003786Direct
Skp1 dimerisation domain-like0.0000485Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0001045Direct
post-AAA+ oligomerization domain-like0.0003396Direct
Cdc48 domain 2-like0.0003396Direct
ADC-like0.0003396Direct
Nucleic acid-binding proteins0.0009396Direct
S15/NS1 RNA-binding domain0.001442Inherited
GroEL equatorial domain-like0.002054Inherited
GroEL-intermediate domain like0.002054Inherited
"Winged helix" DNA-binding domain0.002209Inherited
Class II aaRS and biotin synthetases0.00234Inherited
CCCH zinc finger0.002898Inherited
Activating enzymes of the ubiquitin-like proteins0.00476Inherited
FKBP-like0.00481Inherited
Sm-like ribonucleoproteins0.004978Inherited
GroEL apical domain-like0.01042Inherited
L30e-like0.01091Inherited
ARM repeat0.0171Inherited
Actin-like ATPase domain0.01779Inherited
POZ domain0.02563Inherited
Ribosomal proteins S24e, L23 and L15e0.05582Inherited
Translational machinery components0.05582Inherited
F1F0 ATP synthase subunit C0.05582Inherited
DNA repair protein MutS, domain III0.05582Inherited
p53-like transcription factors0.05639Inherited
Ribosomal protein S5 domain 2-like0.0789Inherited
TPR-like0.1002Inherited
Tubulin nucleotide-binding domain-like0.1117Inherited
Translation proteins SH3-like domain0.1117Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.1851Inherited
Quinoprotein alcohol dehydrogenase-like0.1851Inherited
Tubulin C-terminal domain-like0.1864Inherited
Cyclin-like0.2539Inherited
Prefoldin0.2986Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.2986Inherited
BAR/IMD domain-like0.3699Inherited
Nucleotidylyl transferase0.4661Inherited
Calponin-homology domain, CH-domain0.527Inherited
SNARE-like0.6349Inherited
Translation proteins0.6445Inherited
PDZ domain-like0.651Inherited
GTPase activation domain, GAP0.6846Inherited
Protein kinase-like (PK-like)0.696Inherited
Homeodomain-like0.7431Inherited
PX domain0.9174Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Ribosomal protein L10Direct
LEM domain0Direct
Nucleosome core histones0Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
DNA gyrase/MutL, second domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Smc hinge domain0Direct
Profilin (actin-binding protein)0Direct
Proteasome subunits0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000001473Direct
Extended AAA-ATPase domain0.0000009846Direct
RecA protein-like (ATPase-domain)0.000009008Direct
Skp1 dimerisation domain-like0.00004446Direct
Frizzled cysteine-rich domain0.00006936Direct
BTB/POZ domain0.0000793Direct
DNA polymerase III clamp loader subunits, C-terminal domain0.000525Direct
DNA gyrase/MutL, N-terminal domain0.000525Direct
Anticodon-binding domain of Class II aaRS0.000525Direct
Cdc48 N-terminal domain-like0.000525Direct
Anticodon-binding domain0.000525Direct
Cdc48 domain 2-like0.000525Direct
Group II chaperonin (CCT, TRIC), apical domain0.001771Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.002057Inherited
DEP domain0.002222Inherited
Actin/HSP700.003734Inherited
Sm motif of small nuclear ribonucleoproteins, SNRNP0.004137Inherited
Armadillo repeat0.00441Inherited
CCCH zinc finger0.007736Inherited
FKBP immunophilin/proline isomerase0.008354Inherited
DNA replication initiator (cdc21/cdc54) N-terminal domain0.009534Inherited
Motor proteins0.009754Inherited
L30e/L7ae ribosomal proteins0.02194Inherited
G proteins0.03845Inherited
Translational machinery components0.03925Inherited
F1F0 ATP synthase subunit C0.04996Inherited
DNA repair protein MutS, domain III0.04996Inherited
ABC transporter ATPase domain-like0.07604Inherited
Pumilio repeat0.09434Inherited
Tubulin, GTPase domain0.1043Inherited
Cold shock DNA-binding domain-like0.1131Inherited
Prefoldin0.1509Inherited
Tubulin, C-terminal domain0.1766Inherited
Cyclin0.2637Inherited
Elongation factors0.2718Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.2792Inherited
Nitrogenase iron protein-like0.2833Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.2833Inherited
Clathrin adaptor core protein0.4242Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.4835Inherited
Protein kinases, catalytic subunit0.4896Inherited
Tetratricopeptide repeat (TPR)0.4901Inherited
BCR-homology GTPase activation domain (BH-domain)0.5172Inherited
Calponin-homology domain, CH-domain0.519Inherited
PDZ domain0.5479Inherited
Homeodomain0.6882Inherited
PX domain0.9082Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
The spindle assembly checkpoint protein mad20Direct
Ribosomal protein L10Direct
Histone-fold0Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Profilin (actin-binding protein)0Direct
LEM domain0Direct
Smc hinge domain0Direct
P-loop containing nucleoside triphosphate hydrolases0.0000132Direct
Frizzled cysteine-rich domain0.00003114Direct
Skp1 dimerisation domain-like0.00003995Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.00008627Direct
post-AAA+ oligomerization domain-like0.0002817Direct
ADC-like0.0002817Direct
Cdc48 domain 2-like0.0002817Direct
Nucleic acid-binding proteins0.0007871Direct
S15/NS1 RNA-binding domain0.001211Inherited
GroEL-intermediate domain like0.001732Inherited
GroEL equatorial domain-like0.001732Inherited
"Winged helix" DNA-binding domain0.001865Inherited
Class II aaRS and biotin synthetases0.001978Inherited
CCCH zinc finger0.002453Inherited
Activating enzymes of the ubiquitin-like proteins0.004049Inherited
FKBP-like0.004095Inherited
Sm-like ribonucleoproteins0.004239Inherited
GroEL apical domain-like0.008978Inherited
L30e-like0.009402Inherited
ARM repeat0.01483Inherited
Actin-like ATPase domain0.01544Inherited
POZ domain0.02242Inherited
F1F0 ATP synthase subunit C0.04961Inherited
Ribosomal proteins S24e, L23 and L15e0.04961Inherited
Translational machinery components0.04961Inherited
DNA repair protein MutS, domain III0.04961Inherited
p53-like transcription factors0.05013Inherited
Ribosomal protein S5 domain 2-like0.07081Inherited
TPR-like0.09044Inherited
Translation proteins SH3-like domain0.1012Inherited
Tubulin nucleotide-binding domain-like0.1012Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.1702Inherited
Quinoprotein alcohol dehydrogenase-like0.1702Inherited
Tubulin C-terminal domain-like0.1714Inherited
Cyclin-like0.2362Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.2793Inherited
Prefoldin0.2793Inherited
BAR/IMD domain-like0.3495Inherited
Nucleotidylyl transferase0.4447Inherited
Calponin-homology domain, CH-domain0.5048Inherited
SNARE-like0.6132Inherited
Translation proteins0.6229Inherited
PDZ domain-like0.6295Inherited
GTPase activation domain, GAP0.6637Inherited
Protein kinase-like (PK-like)0.6754Inherited
Homeodomain-like0.7229Inherited
PX domain0.9028Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55874,54211
  • 55874 - ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
  • 54211 - Ribosomal protein S5 domain 2-like
  • 0Direct
    50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.00008627Direct
    55681,52954
  • 55681 - Class II aaRS and biotin synthetases
  • 52954 - Class II aaRS ABD-related
  • 0.0002817Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.0002817Direct
    52540,48019
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 48019 - post-AAA+ oligomerization domain-like
  • 0.0002817Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.001211Inherited
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0.001211Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001732Inherited
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.001732Inherited
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.002142Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.007798Inherited
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.02167Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.03711Inherited
    48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.04961Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.06378Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.1012Inherited
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.1012Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.2653Inherited
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.2793Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.2983Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.9824Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.001732Inherited
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.2793Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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