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Worm Phenotype (WP): spindle position orientation defective early emb

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + + + + 11:   Variant [WBPhenotype:0000886] <2>
+ + + + + + + 7:   morphology variant [WBPhenotype:0000520] <5>(443|524) (443|228|63)
+ + + + + + 6:   organelle organization biogenesis variant [WBPhenotype:0001344] <10>(29|29) (30|10|1)
+ + + + + + 6:   cell morphology variant [WBPhenotype:0000533] <10>(104|102) (106|54|17)
+ + + + + + 6:   development variant [WBPhenotype:0000518] <6>(507|580) (507|247|68)
+ + + + + 5:   cytoskeleton organization biogenesis variant [WBPhenotype:0001345] <3>(14|14) (14|5|0)
+ + + + + 5:   lethal [WBPhenotype:0000062] <5>(497|575) (497|246|68)
+ + + + + 5:   organism development variant [WBPhenotype:0000531] <10>(504|578) (504|247|68)
+ + + + + 5:   cell component morphology variant [WBPhenotype:0002089] <18>(82|83) (82|42|9)
+ + + + + 5:   cell physiology variant [WBPhenotype:0000536] <35>(156|154) (158|67|19)
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ + + + 4:   embryonic lethal [WBPhenotype:0000050] <7>(443|532) (443|231|63)
+ + + + 4:   embryonic cell physiology variant [WBPhenotype:0000763] <1>(13|17) (13|7|0)
+ + + + 4:   cell organization biogenesis variant [WBPhenotype:0010002] <5>(40|43) (41|18|4)
+ + + + 4:   microtubule organization biogenesis variant [WBPhenotype:0001588] <4>(9|11) (9|5|0)
+ + + + 4:   embryonic development variant [WBPhenotype:0000749] <21>(445|532) (445|232|63)
+ + + + 4:   cell division variant [WBPhenotype:0000746] <20>(51|53) (51|20|4)
+ + + 3:   spindle variant [WBPhenotype:0002414] <8>(7|11) (7|5|0)
+ + + 3:   embryonic cell organization biogenesis variant [WBPhenotype:0000764] <6>(13|17) (13|7|0)
+ + + 3:   early embryonic lethal [WBPhenotype:0001100] <31>(53|58) (55|23|4)
+ + 2:   spindle defective early emb [WBPhenotype:0000759] <2>(7|11) (7|5|0)
+ 1:   mitotic spindle defective early emb [WBPhenotype:0001102] <6>(7|9) (7|4|0)
0:   spindle position orientation defective early emb [WBPhenotype:0000761] <4>(4|6) (4|2|0)
- 1:   spindle position defective early emb [WBPhenotype:0000762] <1>(2|2) (2|1|0)
- 1:   spindle orientation defective early emb [WBPhenotype:0000760](0|1) (0|0|0)
- 1:   spindle orientation variant [WBPhenotype:0001681](2|2) (2|1|0)
- 1:   spindle orientation variant AB or P1 early emb [WBPhenotype:0001106](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
POZ domain0.000000002117Direct
Tubulin nucleotide-binding domain-like0.0000002442Direct
Tubulin C-terminal domain-like0.0000003704Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
BTB/POZ domain0.000000000000003435Direct
Tubulin, GTPase domain0.0000005306Direct
Tubulin, C-terminal domain0.0000008028Direct
G proteins0.000002148Direct
Armadillo repeat0.9382Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
POZ domain0.000000001689Direct
Tubulin nucleotide-binding domain-like0.000000197Direct
Tubulin C-terminal domain-like0.0000002991Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.000000197Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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