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Worm Phenotype (WP): embryonic cell physiology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <4>
+ + 2:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ 1:   blast cell physiology variant [WBPhenotype:0000985] <26>(152|154) (153|66|17)
+ 1:   cell physiology variant [WBPhenotype:0000536] <26>(152|154) (153|66|17)
0:   embryonic cell physiology variant [WBPhenotype:0000763] <1>(13|17) (13|7|0)
- 1:   embryonic cell organization biogenesis variant [WBPhenotype:0000764] <6>(13|17) (13|7|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000000002525Direct
Tubulin C-terminal domain-like0.000001187Direct
P-loop containing nucleoside triphosphate hydrolases0.000003765Direct
Tubulin nucleotide-binding domain-like0.000007471Direct
Prefoldin0.00001315Direct
POZ domain0.00002238Direct
ARM repeat0.004338Inherited
TPR-like0.005507Inherited
Cyclin-like0.02278Inherited
DNA/RNA polymerases0.03911Inherited
WD40 repeat-like0.05827Inherited
Nucleic acid-binding proteins0.1191Inherited
"Winged helix" DNA-binding domain0.1532Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000000002967Direct
BTB/POZ domain0.0000000235Direct
Prefoldin0.00000006238Direct
Tubulin, C-terminal domain0.000001129Direct
Armadillo repeat0.000006943Direct
Tubulin, GTPase domain0.000006943Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0.00001162Direct
DEP domain0.00002692Direct
Motor proteins0.00004124Direct
DNA polymerase I0.0006206Direct
Extended AAA-ATPase domain0.0006609Direct
DnaQ-like 3'-5' exonuclease0.001302Inherited
Pumilio repeat0.002982Inherited
Cyclin0.004374Inherited
G proteins0.006551Inherited
PDZ domain0.01556Inherited
WD40-repeat0.03751Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0.0000000000001998Direct
Tubulin C-terminal domain-like0.0000009667Direct
P-loop containing nucleoside triphosphate hydrolases0.000003079Direct
Tubulin nucleotide-binding domain-like0.00000611Direct
Prefoldin0.00001078Direct
POZ domain0.00001836Direct
ARM repeat0.00369Inherited
TPR-like0.004695Inherited
Cyclin-like0.01988Inherited
DNA/RNA polymerases0.03454Inherited
WD40 repeat-like0.05185Inherited
Nucleic acid-binding proteins0.108Inherited
"Winged helix" DNA-binding domain0.1401Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.000000000001419Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.00000611Direct
    53098,56672
  • 53098 - Ribonuclease H-like
  • 56672 - DNA/RNA polymerases
  • 0.00003877Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.001223Inherited
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.03156Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.1312Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.1432Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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