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Worm Phenotype (WP): embryonic cell morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   morphology variant [WBPhenotype:0000520] <9>(440|519) (440|228|63)
+ + 2:   cell morphology variant [WBPhenotype:0000533] <11>(104|105) (106|54|17)
+ 1:   cell type morphology variant [WBPhenotype:0002108] <12>(79|80) (81|44|15)
0:   embryonic cell morphology variant [WBPhenotype:0000770] <7>(6|8) (6|4|0)
- 1:   nuclear appearance number defective early emb [WBPhenotype:0001035] <9>(5|7) (5|3|0)
- 1:   nuclear morphology variation early emb [WBPhenotype:0001026] <9>(6|8) (6|4|0)
- 1:   nucleus defective early emb [WBPhenotype:0001138] <9>(5|7) (5|3|0)
- 1:   pronuclear morphology defective early emb [WBPhenotype:0001159] <9>(5|7) (5|3|0)
- 1:   pronuclear nuclear appearance defective early emb [WBPhenotype:0001034] <9>(5|7) (5|3|0)
- 1:   pronucleus centrosomes defective early emb [WBPhenotype:0001151] <9>(5|7) (5|3|0)
- 1:   centrosome attachment defective early emb [WBPhenotype:0000771](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Tubulin C-terminal domain-like0.000004239Direct
Tubulin nucleotide-binding domain-like0.00002433Direct
Cyclin-like0.00007972Direct
DNA/RNA polymerases0.0007311Direct
Nucleic acid-binding proteins0.002291Inherited
Prefoldin0.003024Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA replication initiator (cdc21/cdc54) N-terminal domain0.0000000004234Direct
Tubulin, C-terminal domain0.000004115Direct
Cyclin0.00001205Direct
Tubulin, GTPase domain0.00002303Direct
DNA polymerase I0.0000232Direct
Extended AAA-ATPase domain0.00006096Direct
Pumilio repeat0.000448Direct
Prefoldin0.0006354Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Tubulin C-terminal domain-like0.000003466Direct
Tubulin nucleotide-binding domain-like0.00001997Direct
Cyclin-like0.00006574Direct
DNA/RNA polymerases0.0006111Direct
Nucleic acid-binding proteins0.001936Inherited
Prefoldin0.00256Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
53098,56672
  • 53098 - Ribonuclease H-like
  • 56672 - DNA/RNA polymerases
  • 0.000004901Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.00001102Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.00001997Direct
    48452,48452
  • 48452 - TPR-like
  • 48452 - TPR-like
  • 0.07007Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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