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Worm Phenotype (WP): chromosome segregation variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + 3:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <36>(149|149) (150|64|19)
+ 1:   cell homeostasis metabolism variant [WBPhenotype:0000585] <12>(60|54) (60|23|12)
0:   chromosome segregation variant [WBPhenotype:0000773] <6>(10|9) (10|2|0)
- 1:   meiotic chromosome segregation variant [WBPhenotype:0001499] <2>(6|4) (6|1|0)
- 1:   mitotic chromosome segregation variant [WBPhenotype:0001378] <2>(2|3) (2|0|0)
- 1:   aneuploidy [WBPhenotype:0001882] <1>(6|4) (6|1|0)
- 1:   chromosome alignment variant [WBPhenotype:0001584](0|0) (0|0|0)
- 1:   chromosome segregation variant karyomeres early emb [WBPhenotype:0001077](1|1) (1|1|0)
- 1:   sister chromatid segregation defective early emb [WBPhenotype:0000772](2|2) (2|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
LEM domain0Direct
Histone-fold0Direct
The spindle assembly checkpoint protein mad20Direct
Smc hinge domain0.000000002708Direct
Skp1 dimerisation domain-like0.0009272Direct
Cyclin-like0.02121Inherited
P-loop containing nucleoside triphosphate hydrolases0.04406Inherited
POZ domain0.05914Inherited
Nucleic acid-binding proteins0.1229Inherited
"Winged helix" DNA-binding domain0.3292Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleosome core histones0Direct
Smc hinge domain0Direct
LEM domain0Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0.000000005163Direct
Motor proteins0.0001259Direct
BTB/POZ domain0.0009625Direct
Skp1 dimerisation domain-like0.001153Inherited
Cyclin0.008214Inherited
ABC transporter ATPase domain-like0.01842Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
LEM domain0Direct
The spindle assembly checkpoint protein mad20Direct
Histone-fold0Direct
Smc hinge domain0.000000002155Direct
Skp1 dimerisation domain-like0.0007715Direct
Cyclin-like0.01848Inherited
P-loop containing nucleoside triphosphate hydrolases0.03892Inherited
POZ domain0.05263Inherited
Nucleic acid-binding proteins0.1116Inherited
"Winged helix" DNA-binding domain0.3096Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.0004723Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.09611Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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