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Worm Phenotype (WP): gametogenesis variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <4>
+ + 2:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ 1:   cell development variant [WBPhenotype:0000529] <17>(128|124) (129|49|15)
0:   gametogenesis variant [WBPhenotype:0000774] <2>(65|59) (66|27|6)
- 1:   germ cell development variant [WBPhenotype:0000812] <8>(63|59) (64|27|6)
- 1:   germ cell differentiation variant [WBPhenotype:0000894] <3>(36|39) (36|15|2)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Smc hinge domain0Direct
The spindle assembly checkpoint protein mad20Direct
GroEL equatorial domain-like0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Helical domain of Sec23/240Direct
Ribosomal protein L10Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Zn-finger domain of Sec23/240Direct
LEM domain0Direct
Ribosomal protein L10-like0Direct
GroEL-intermediate domain like0Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
14-3-3 protein0Direct
GroEL apical domain-like0.000000001574Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.000007944Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0001517Direct
Histone-fold0.0003015Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0004282Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.0004282Direct
RBP11-like subunits of RNA polymerase0.00052Direct
beta-sandwich domain of Sec23/240.00052Direct
DNA repair protein MutS, domain III0.00052Direct
Cdc48 domain 2-like0.00052Direct
ADC-like0.00052Direct
Nucleic acid-binding proteins0.0006924Direct
Sm-like ribonucleoproteins0.0008965Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.000927Direct
Ribosomal proteins S24e, L23 and L15e0.002173Inherited
F1F0 ATP synthase subunit C0.002173Inherited
S15/NS1 RNA-binding domain0.002173Inherited
POZ domain0.003308Inherited
Translational machinery components0.005519Inherited
Sec1/munc18-like (SM) proteins0.005519Inherited
Ribosomal protein S5 domain 2-like0.005823Inherited
Skp1 dimerisation domain-like0.008787Inherited
Quinoprotein alcohol dehydrogenase-like0.009358Inherited
ACP-like0.01106Inherited
Translation proteins0.01612Inherited
P-loop containing nucleoside triphosphate hydrolases0.02578Inherited
Retrovirus zinc finger-like domains0.02836Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.02991Inherited
PAZ domain0.03105Inherited
"Winged helix" DNA-binding domain0.03593Inherited
TPR-like0.03757Inherited
HMG-box0.04064Inherited
Class II aaRS and biotin synthetases0.04547Inherited
Class II aaRS ABD-related0.0497Inherited
L30e-like0.0497Inherited
WD40 repeat-like0.05291Inherited
Cullin homology domain0.08634Inherited
FKBP-like0.08634Inherited
Translation proteins SH3-like domain0.1033Inherited
ARM repeat0.1958Inherited
SET domain0.2217Inherited
Nucleotidylyl transferase0.2387Inherited
Activating enzymes of the ubiquitin-like proteins0.2441Inherited
SMAD MH1 domain0.3607Inherited
CCCH zinc finger0.4047Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.4726Inherited
SNARE-like0.4726Inherited
RNA-binding domain, RBD0.4906Inherited
EGF/Laminin0.6837Inherited
Cysteine-rich domain0.7567Inherited
Protein kinase-like (PK-like)0.9944Inherited
F-box domain1Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Ribosomal protein L10Direct
LEM domain0Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
Zn-finger domain of Sec23/240Direct
Helical domain of Sec23/240Direct
Group II chaperonin (CCT, TRIC), intermediate domain0Direct
beta-sandwich domain of Sec23/240Direct
Group II chaperonin (CCT, TRIC), ATPase domain0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
Smc hinge domain0Direct
POU-specific domain0Direct
RNA-polymerase beta0Direct
Proteasome subunits0Direct
14-3-3 protein0Direct
Trunk domain of Sec23/240Direct
Group II chaperonin (CCT, TRIC), apical domain0.00000003412Direct
RecA protein-like (ATPase-domain)0.00001344Direct
Nucleosome core histones0.0003784Direct
DNA gyrase/MutL, N-terminal domain0.0006813Direct
Cdc48 N-terminal domain-like0.0006813Direct
DNA repair protein MutS, domain III0.0006813Direct
Anticodon-binding domain0.0006813Direct
Cdc48 domain 2-like0.0006813Direct
Extended AAA-ATPase domain0.0008058Direct
BTB/POZ domain0.0009231Direct
F1F0 ATP synthase subunit C0.002861Inherited
Translational machinery components0.00333Inherited
Sm motif of small nuclear ribonucleoproteins, SNRNP0.004026Inherited
Skp1 dimerisation domain-like0.006913Inherited
Cyclin0.007252Inherited
Pumilio repeat0.01307Inherited
Cold shock DNA-binding domain-like0.01392Inherited
WD40-repeat0.01757Inherited
Retrovirus zinc finger-like domains0.02338Inherited
HMG-box0.03392Inherited
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.03792Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.03941Inherited
Elongation factors0.04257Inherited
Ubiquitin-related0.06377Inherited
FKBP immunophilin/proline isomerase0.07418Inherited
DNA replication initiator (cdc21/cdc54) N-terminal domain0.07418Inherited
L30e/L7ae ribosomal proteins0.07418Inherited
Actin/HSP700.08493Inherited
Clathrin adaptor core protein0.1306Inherited
Anticodon-binding domain of Class II aaRS0.1306Inherited
RNA editing terminal uridyl transferase 2, RET2, domain 20.1306Inherited
SMAD domain0.2199Inherited
Tetratricopeptide repeat (TPR)0.2864Inherited
Canonical RBD0.3123Inherited
Motor proteins0.3317Inherited
Nitrogenase iron protein-like0.3329Inherited
SMAD MH1 domain0.3329Inherited
CCCH zinc finger0.3751Inherited
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.3751Inherited
Histone lysine methyltransferases0.3961Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.5648Inherited
G proteins0.8398Inherited
Protein kinases, catalytic subunit0.8775Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
The spindle assembly checkpoint protein mad20Direct
GroEL-intermediate domain like0Direct
GroEL equatorial domain-like0Direct
14-3-3 protein0Direct
Ribosomal protein L10Direct
Ribosomal protein L10-like0Direct
Helical domain of Sec23/240Direct
C-terminal, gelsolin-like domain of Sec23/240Direct
Zn-finger domain of Sec23/240Direct
N-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
C-terminal domain of alpha and beta subunits of F1 ATP synthase0Direct
LEM domain0Direct
Smc hinge domain0Direct
GroEL apical domain-like0.00000000126Direct
beta and beta-prime subunits of DNA dependent RNA-polymerase0.000006498Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0001253Direct
Histone-fold0.00025Direct
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase0.0003557Direct
Heat shock protein 70kD (HSP70), peptide-binding domain0.0003557Direct
beta-sandwich domain of Sec23/240.0004325Direct
RBP11-like subunits of RNA polymerase0.0004325Direct
DNA repair protein MutS, domain III0.0004325Direct
ADC-like0.0004325Direct
Cdc48 domain 2-like0.0004325Direct
Nucleic acid-binding proteins0.0005783Direct
Sm-like ribonucleoproteins0.0007507Direct
Heat shock protein 70kD (HSP70), C-terminal subdomain0.0007765Direct
S15/NS1 RNA-binding domain0.001834Inherited
F1F0 ATP synthase subunit C0.001834Inherited
Ribosomal proteins S24e, L23 and L15e0.001834Inherited
POZ domain0.002804Inherited
Translational machinery components0.004705Inherited
Sec1/munc18-like (SM) proteins0.004705Inherited
Ribosomal protein S5 domain 2-like0.004968Inherited
Skp1 dimerisation domain-like0.007551Inherited
Quinoprotein alcohol dehydrogenase-like0.008049Inherited
ACP-like0.009534Inherited
Translation proteins0.01397Inherited
P-loop containing nucleoside triphosphate hydrolases0.02254Inherited
Retrovirus zinc finger-like domains0.02486Inherited
PAP/OAS1 substrate-binding domain0.02486Inherited
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.02625Inherited
PAZ domain0.02727Inherited
"Winged helix" DNA-binding domain0.03169Inherited
TPR-like0.03316Inherited
HMG-box0.03592Inherited
Class II aaRS and biotin synthetases0.04026Inherited
Class II aaRS ABD-related0.04409Inherited
L30e-like0.04409Inherited
WD40 repeat-like0.04697Inherited
Cullin homology domain0.07766Inherited
FKBP-like0.07766Inherited
Translation proteins SH3-like domain0.0934Inherited
ARM repeat0.1802Inherited
SET domain0.205Inherited
Nucleotidylyl transferase0.2213Inherited
Activating enzymes of the ubiquitin-like proteins0.2265Inherited
SMAD MH1 domain0.3405Inherited
CCCH zinc finger0.3835Inherited
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.4507Inherited
SNARE-like0.4507Inherited
RNA-binding domain, RBD0.4685Inherited
EGF/Laminin0.6627Inherited
Cysteine-rich domain0.7367Inherited
Protein kinase-like (PK-like)0.9839Inherited
F-box domain1Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0Direct
    81811,82754
  • 81811 - Helical domain of Sec23/24
  • 82754 - C-terminal, gelsolin-like domain of Sec23/24
  • 0Direct
    50692,54585
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 0Direct
    54585,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    52540,47917
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 47917 - C-terminal domain of alpha and beta subunits of F1 ATP synthase
  • 0Direct
    82919,53300
  • 82919 - Zn-finger domain of Sec23/24
  • 53300 - vWA-like
  • 0Direct
    100920,100934
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0001364Direct
    53067,100920
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003557Direct
    81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.0004325Direct
    48334,52540
  • 48334 - DNA repair protein MutS, domain III
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0004325Direct
    52540,46785
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0004325Direct
    50249,55681
  • 50249 - Nucleic acid-binding proteins
  • 55681 - Class II aaRS and biotin synthetases
  • 0.001834Inherited
    54534,54534
  • 54534 - FKBP-like
  • 54534 - FKBP-like
  • 0.001834Inherited
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0.01168Inherited
    52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.01833Inherited
    81301,81631
  • 81301 - Nucleotidyltransferase
  • 81631 - PAP/OAS1 substrate-binding domain
  • 0.02486Inherited
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.02625Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.07766Inherited
    52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.07766Inherited
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.1174Inherited
    55681,52954
  • 55681 - Class II aaRS and biotin synthetases
  • 52954 - Class II aaRS ABD-related
  • 0.136Inherited
    48371,48371
  • 48371 - ARM repeat
  • 48371 - ARM repeat
  • 0.147Inherited
    52540,52540
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.3307Inherited
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.4043Inherited
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.6494Inherited
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.7579Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    50692,54585,52540
  • 50692 - ADC-like
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    54585,52540,52540
  • 54585 - Cdc48 domain 2-like
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0Direct
    53067,100920,100934
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 100934 - Heat shock protein 70kD (HSP70), C-terminal subdomain
  • 0.0001364Direct
    53067,53067,100920
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 100920 - Heat shock protein 70kD (HSP70), peptide-binding domain
  • 0.0003557Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.02625Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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