SUPERFAMILY 1.75 HMM library and genome assignments server

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Worm Phenotype (WP): muscle cell development variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <4>
+ + 2:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ 1:   cell development variant [WBPhenotype:0000529] <17>(128|124) (129|49|15)
0:   muscle cell development variant [WBPhenotype:0000815] <1>(8|9) (9|3|1)
- 1:   body wall cell development variant [WBPhenotype:0000087] <2>(8|9) (9|3|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Immunoglobulin0.00000001816Direct
Formin homology 2 domain (FH2 domain)0.00000005654Direct
Protein kinase-like (PK-like)0.0000002283Direct
Fibronectin type III0.000001397Direct
Growth factor receptor domain0.00006746Direct
EGF/Laminin0.0001146Direct
Insulin-like0.0002366Direct
Concanavalin A-like lectins/glucanases0.005819Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Formin homology 2 domain (FH2 domain)0.00000002897Direct
Protein kinases, catalytic subunit0.0000006676Direct
Laminin-type module0.0000007047Direct
I set domains0.000001624Direct
Fibronectin type III0.000003141Direct
Growth factor receptor domain0.0001964Direct
Insulin-like0.0003376Direct
Motor proteins0.001597Inherited
Pleckstrin-homology domain (PH domain)0.002838Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Immunoglobulin0.0000000146Direct
Formin homology 2 domain (FH2 domain)0.0000000456Direct
Protein kinase-like (PK-like)0.0000001847Direct
Fibronectin type III0.000001139Direct
Growth factor receptor domain0.00005559Direct
EGF/Laminin0.00009464Direct
Insulin-like0.0001958Direct
Concanavalin A-like lectins/glucanases0.004965Inherited
PH domain-like0.02164Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.00005559Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0001136Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0004053Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.000006322Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)