SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): cytokinesis defective early emb

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <4>
+ + + + + 5:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + 4:   blast cell physiology variant [WBPhenotype:0000985] <26>(152|154) (153|66|17)
+ + + + 4:   organism development variant [WBPhenotype:0000531] <10>(504|576) (504|246|68)
+ + + + 4:   cell physiology variant [WBPhenotype:0000536] <26>(152|154) (153|66|17)
+ + + 3:   cell division variant [WBPhenotype:0000746] <20>(55|57) (55|24|4)
+ + + 3:   embryonic development variant [WBPhenotype:0000749] <21>(445|531) (445|231|63)
+ + + 3:   lethal [WBPhenotype:0000062] <5>(498|574) (498|245|68)
+ + 2:   cytokinesis variant [WBPhenotype:0002408] <5>(11|12) (11|2|0)
+ + 2:   embryonic lethal [WBPhenotype:0000050] <7>(443|531) (443|230|63)
+ 1:   cytokinesis variant emb [WBPhenotype:0001018] <1>(11|12) (11|2|0)
+ 1:   early embryonic lethal [WBPhenotype:0001100] <30>(61|63) (61|26|4)
0:   cytokinesis defective early emb [WBPhenotype:0001078] <3>(6|8) (6|0|0)
- 1:   cleavage furrow defective early emb [WBPhenotype:0001129] <7>(4|5) (4|0|0)
- 1:   cytokinesis fails early emb [WBPhenotype:0001130](0|1) (0|0|0)
- 1:   sister chromatid segregation defective early emb [WBPhenotype:0000772](2|2) (2|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Histone-fold0Direct
P-loop containing nucleoside triphosphate hydrolases0.0009897Direct
Calponin-homology domain, CH-domain0.002811Inherited
GTPase activation domain, GAP0.00367Inherited
BAR/IMD domain-like0.01413Inherited
Nucleic acid-binding proteins0.05188Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Nucleosome core histones0Direct
DNA replication initiator (cdc21/cdc54) N-terminal domain0.0001633Direct
Calponin-homology domain, CH-domain0.002789Inherited
Pumilio repeat0.003543Inherited
Extended AAA-ATPase domain0.01316Inherited
BCR-homology GTPase activation domain (BH-domain)0.01356Inherited
Motor proteins0.02321Inherited
Actin/HSP700.4228Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Histone-fold0Direct
P-loop containing nucleoside triphosphate hydrolases0.0008295Direct
Calponin-homology domain, CH-domain0.002379Inherited
GTPase activation domain, GAP0.003115Inherited
BAR/IMD domain-like0.01222Inherited
Nucleic acid-binding proteins0.04603Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)