SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): pericellular component physiology variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Variant [WBPhenotype:0000886] <2>
+ 1:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
0:   pericellular component physiology variant [WBPhenotype:0001210] <4>(6|6) (7|1|0)
- 1:   lectin response variant [WBPhenotype:0002031] <5>(1|0) (1|0|0)
- 1:   cuticle physiology variant [WBPhenotype:0001678] <2>(3|3) (3|0|0)
- 1:   alae secretion variant [WBPhenotype:0000168] <1>(2|3) (2|1|0)
- 1:   cuticle carbohydrate surface variant [WBPhenotype:0001411](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Hedgehog/intein (Hint) domain0.000000000003263Direct
Multidrug efflux transporter AcrB transmembrane domain0.00000000005748Direct
Troponin coil-coiled subunits0.000001956Direct
Protein kinase-like (PK-like)0.00001717Direct
SMAD/FHA domain0.0001941Direct
Nucleotide-diphospho-sugar transferases0.004887Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Hedgehog C-terminal (Hog) autoprocessing domain0.0000000000102Direct
Multidrug efflux transporter AcrB transmembrane domain0.00000000009798Direct
Troponin I0.00000005142Direct
SMAD domain0.000003283Direct
Armadillo repeat0.00002153Direct
Protein kinases, catalytic subunit0.00002482Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Hedgehog/intein (Hint) domain0.000000000002573Direct
Multidrug efflux transporter AcrB transmembrane domain0.00000000004545Direct
Troponin coil-coiled subunits0.000001585Direct
Protein kinase-like (PK-like)0.000014Direct
SMAD/FHA domain0.0001594Direct
ARM repeat0.0008749Direct
Nucleotide-diphospho-sugar transferases0.004151Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.002769Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)