SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): commissure absent

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + + 9:   Variant [WBPhenotype:0000886] <4>
+ + + + + + + 7:   organ system morphology variant [WBPhenotype:0000534] <9>(98|101) (99|48|16)
+ + + + + + + 7:   morphology variant [WBPhenotype:0000520] <9>(440|519) (440|228|63)
+ + + + + + 6:   nervous system morphology variant [WBPhenotype:0000604] <7>(30|26) (30|10|3)
+ + + + + + 6:   cell type morphology variant [WBPhenotype:0002108] <12>(79|80) (81|44|15)
+ + + + + + 6:   cell morphology variant [WBPhenotype:0000533] <11>(104|105) (106|54|17)
+ + + + + 5:   neuron morphology variant [WBPhenotype:0000905] <5>(14|9) (14|5|2)
+ + + + + 5:   cell component morphology variant [WBPhenotype:0002089] <19>(81|85) (81|43|9)
+ + + + 4:   neurite morphology variant [WBPhenotype:0001398] <1>(13|8) (13|4|2)
+ + + 3:   axon morphology variant [WBPhenotype:0000180] <4>(11|7) (11|4|2)
+ + 2:   axon trajectory variant [WBPhenotype:0000181] <2>(3|3) (3|0|0)
+ 1:   commissure variant [WBPhenotype:0001226] <3>(1|2) (1|0|0)
0:   commissure absent [WBPhenotype:0001227](1|1) (1|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Fibronectin type III0.0003606Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Fibronectin type III0.0005724Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Fibronectin type III0.0002991Direct


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)