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Worm Phenotype (WP): vulval cell induction variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <4>
+ + + + 4:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + + + 4:   organ system development variant [WBPhenotype:0000530] <10>(78|72) (80|31|12)
+ + + 3:   reproductive system development variant [WBPhenotype:0000624] <10>(47|39) (48|20|8)
+ + + 3:   cell development variant [WBPhenotype:0000529] <17>(128|124) (129|49|15)
+ + 2:   vulva development variant [WBPhenotype:0000699] <3>(17|13) (17|3|1)
+ + 2:   cell fate specification variant [WBPhenotype:0000216] <7>(21|18) (21|5|1)
+ 1:   vulva cell fate specification variant [WBPhenotype:0000220] <2>(14|12) (14|3|1)
0:   vulval cell induction variant [WBPhenotype:0001272] <4>(12|11) (12|2|1)
- 1:   vulval cell induction increased [WBPhenotype:0000218] <1>(11|8) (11|2|1)
- 1:   vulval cell induction reduced [WBPhenotype:0000219] <1>(3|2) (3|0|0)
- 1:   adoption of fused vulval cell fate [WBPhenotype:0001680](0|0) (0|0|0)
- 1:   gonad independent vulva differentiation [WBPhenotype:0002027](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Sm-like ribonucleoproteins0.00000000000334Direct
FYVE/PHD zinc finger0.000000005957Direct
Bromodomain0.00000004593Direct
E2F-DP heterodimerization region0.0000007848Direct
Chromo domain-like0.00001042Direct
RNA-binding domain, RBD0.00003263Direct
SET domain0.0003465Direct
HIT/MYND zinc finger-like0.0005457Direct
WD40 repeat-like0.001238Inherited
HMG-box0.00147Inherited
Homeodomain-like0.001585Inherited
"Winged helix" DNA-binding domain0.5609Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Sm motif of small nuclear ribonucleoproteins, SNRNP0.000000000867Direct
Bromodomain0.0000001451Direct
Cell cycle transcription factor e2f-dp0.000001355Direct
PHD domain0.000002194Direct
Histone lysine methyltransferases0.00001323Direct
Pumilio repeat0.0002227Direct
PDZ domain0.0004244Direct
TBP-associated factors, TAFs0.0004892Direct
Chromo domain0.0006813Direct
WD40-repeat0.001504Inherited
Homeodomain0.01448Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Sm-like ribonucleoproteins0.000000000002653Direct
FYVE/PHD zinc finger0.000000004779Direct
Bromodomain0.00000003702Direct
E2F-DP heterodimerization region0.0000006383Direct
Chromo domain-like0.000008525Direct
RNA-binding domain, RBD0.00002682Direct
SET domain0.0002874Direct
HIT/MYND zinc finger-like0.0004543Direct
WD40 repeat-like0.001038Inherited
HMG-box0.001235Inherited
Homeodomain-like0.001333Inherited
"Winged helix" DNA-binding domain0.5387Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
46785,144074
  • 46785 - "Winged helix" DNA-binding domain
  • 144074 - E2F-DP heterodimerization region
  • 0Direct
    54160,54160
  • 54160 - Chromo domain-like
  • 54160 - Chromo domain-like
  • 0.00001986Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0006015Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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