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Worm Phenotype (WP): ectopic expression transgene

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   Variant [WBPhenotype:0000886] <4>
+ + + + + + + 7:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + + + 6:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
+ + + + + 5:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(346|406) (348|189|55)
+ + + + 4:   organism metabolism processing variant [WBPhenotype:0000027] <25>(171|182) (175|80|24)
+ + + 3:   gene expression variant [WBPhenotype:0000717] <10>(122|134) (127|61|19)
+ + 2:   transgene expression variant [WBPhenotype:0000306] <3>(84|95) (88|41|13)
+ 1:   pattern of transgene expression variant [WBPhenotype:0000961] <2>(47|55) (50|26|11)
0:   ectopic expression transgene [WBPhenotype:0001276](6|5) (6|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
CCCH zinc finger0.00000002087Direct
Homeodomain-like0.00000008512Direct
FYVE/PHD zinc finger0.0000004559Direct
Chromo domain-like0.000006884Direct
HLH, helix-loop-helix DNA-binding domain0.00008684Direct
p53-like transcription factors0.0006666Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
CCCH zinc finger0.0000000287Direct
PHD domain0.00002201Direct
HLH, helix-loop-helix DNA-binding domain0.0001025Direct
N-acetyl transferase, NAT0.0001813Direct
Homeodomain0.0004137Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
CCCH zinc finger0.00000001679Direct
Homeodomain-like0.00000006872Direct
FYVE/PHD zinc finger0.0000003695Direct
Chromo domain-like0.000005632Direct
HLH, helix-loop-helix DNA-binding domain0.00007165Direct
p53-like transcription factors0.0005563Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.0000000009483Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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