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Worm Phenotype (WP): electrophysiology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Variant [WBPhenotype:0000886] <2>
+ 1:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
0:   electrophysiology variant [WBPhenotype:0001315] <5>(10|9) (10|2|0)
- 1:   current measurement variant [WBPhenotype:0002014] <2>(2|2) (2|1|0)
- 1:   endogenous synaptic events variant [WBPhenotype:0001318] <2>(0|0) (0|0|0)
- 1:   evoked postsynaptic current variant [WBPhenotype:0001316] <1>(0|0) (0|0|0)
- 1:   voltage gated channel activity variant [WBPhenotype:0002197] <1>(0|0) (0|0|0)
- 1:   voltage measurement variant [WBPhenotype:0002015](1|1) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Clc chloride channel0Direct
CBS-domain pair0.00000000002044Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000000006661Direct
Nicotinic receptor ligand binding domain-like0.0000000002721Direct
Voltage-gated potassium channels0.000000001592Direct
Metallo-dependent phosphatases0.000001165Direct
Periplasmic binding protein-like I0.00002329Direct
Transducin (alpha subunit), insertion domain0.00003827Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0009171Direct
P-loop containing nucleoside triphosphate hydrolases0.3588Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Clc chloride channel0Direct
CBS-domain pair0.00000000005759Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0000000004681Direct
Nicotinic receptor ligand binding domain-like0.000000001136Direct
Protein serine/threonine phosphatase0.0000004174Direct
Tetramerization domain of potassium channels0.0000009386Direct
Voltage-gated potassium channels0.000001392Direct
Transducin (alpha subunit), insertion domain0.00008259Direct
G proteins0.04997Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Clc chloride channel0Direct
CBS-domain pair0.00000000001614Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000000005268Direct
Nicotinic receptor ligand binding domain-like0.0000000002157Direct
Voltage-gated potassium channels0.000000001265Direct
Metallo-dependent phosphatases0.0000009419Direct
Periplasmic binding protein-like I0.000019Direct
Transducin (alpha subunit), insertion domain0.00003127Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.000763Direct
P-loop containing nucleoside triphosphate hydrolases0.3385Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.00000000005268Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00003127Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)