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Worm Phenotype (WP): electrophysiology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + 2:   Variant [WBPhenotype:0000886] <4>
+ 1:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
0:   electrophysiology variant [WBPhenotype:0001315] <5>(10|9) (10|2|0)
- 1:   current measurement variant [WBPhenotype:0002014] <2>(2|2) (2|1|0)
- 1:   endogenous synaptic events variant [WBPhenotype:0001318] <2>(0|0) (0|0|0)
- 1:   evoked postsynaptic current variant [WBPhenotype:0001316] <1>(0|0) (0|0|0)
- 1:   voltage gated channel activity variant [WBPhenotype:0002197] <1>(0|0) (0|0|0)
- 1:   voltage measurement variant [WBPhenotype:0002015](1|1) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Clc chloride channel0Direct
CBS-domain pair0.0000000000159Direct
Voltage-gated potassium channels0.000000001013Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000001808Direct
Nicotinic receptor ligand binding domain-like0.00000005642Direct
Metallo-dependent phosphatases0.0000008498Direct
Periplasmic binding protein-like I0.00001969Direct
Transducin (alpha subunit), insertion domain0.00003343Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.0008068Direct
P-loop containing nucleoside triphosphate hydrolases0.3299Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Clc chloride channel0Direct
CBS-domain pair0.00000000004939Direct
Neurotransmitter-gated ion-channel transmembrane pore0.0000001032Direct
Nicotinic receptor ligand binding domain-like0.0000001905Direct
Protein serine/threonine phosphatase0.0000003358Direct
Tetramerization domain of potassium channels0.0000008448Direct
Voltage-gated potassium channels0.000001093Direct
Transducin (alpha subunit), insertion domain0.00007612Direct
G proteins0.04582Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Clc chloride channel0Direct
CBS-domain pair0.00000000001265Direct
Voltage-gated potassium channels0.00000000081Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000001454Direct
Nicotinic receptor ligand binding domain-like0.00000004549Direct
Metallo-dependent phosphatases0.0000006912Direct
Periplasmic binding protein-like I0.00001615Direct
Transducin (alpha subunit), insertion domain0.00002748Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.000675Direct
P-loop containing nucleoside triphosphate hydrolases0.3101Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.00000001454Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.00002748Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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