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Worm Phenotype (WP): protein modification variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <4>
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + + 5:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
+ + + + 4:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(346|406) (348|189|55)
+ + + 3:   organism metabolism processing variant [WBPhenotype:0000027] <25>(171|182) (175|80|24)
+ + 2:   gene expression variant [WBPhenotype:0000717] <10>(122|134) (127|61|19)
+ 1:   protein expression variant [WBPhenotype:0000112] <6>(38|44) (39|19|6)
0:   protein modification variant [WBPhenotype:0001382] <9>(11|9) (11|3|0)
- 1:   protein acetylation variant [WBPhenotype:0001917] <2>(2|2) (2|0|0)
- 1:   protein phosphorylation variant [WBPhenotype:0001349] <2>(4|4) (4|3|0)
- 1:   protein carbonylation variant [WBPhenotype:0002272] <1>(1|1) (1|0|0)
- 1:   protein methylation variant [WBPhenotype:0001383] <1>(3|2) (3|0|0)
- 1:   protein ubiquitination variant [WBPhenotype:0001865] <1>(0|0) (0|0|0)
- 1:   chromatin modification variant [WBPhenotype:0002420](0|0) (0|0|0)
- 1:   protein glycosylation variant [WBPhenotype:0002429](0|0) (0|0|0)
- 1:   protein neddylation variant [WBPhenotype:0001874](0|0) (0|0|0)
- 1:   protein sumoylation variant [WBPhenotype:0002362](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Heme-dependent catalase-like0Direct
Arginase/deacetylase0Direct
SET domain0.00000002286Direct
FYVE/PHD zinc finger0.0001873Direct
Chromo domain-like0.0007823Direct
DHS-like NAD/FAD-binding domain0.0007829Direct
Clavaminate synthase-like0.001822Inherited
Translation proteins0.001822Inherited
Protein kinase-like (PK-like)0.00446Inherited
Transducin (alpha subunit), insertion domain0.01389Inherited
Cyclin-like0.09591Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Histone deacetylase, HDAC0Direct
Sir2 family of transcriptional regulators0Direct
Heme-dependent catalases0Direct
Histone lysine methyltransferases0.000001352Direct
Protein kinases, catalytic subunit0.0006914Direct
PHD domain0.000713Direct
Elongation factors0.0009376Direct
Transducin (alpha subunit), insertion domain0.01293Inherited
Pleckstrin-homology domain (PH domain)0.5234Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Heme-dependent catalase-like0Direct
Arginase/deacetylase0Direct
SET domain0.0000000184Direct
FYVE/PHD zinc finger0.0001548Direct
Chromo domain-like0.0006544Direct
DHS-like NAD/FAD-binding domain0.0006549Direct
Translation proteins0.001534Inherited
Clavaminate synthase-like0.001534Inherited
Protein kinase-like (PK-like)0.003792Inherited
Transducin (alpha subunit), insertion domain0.01201Inherited
Cyclin-like0.08649Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52540,50447
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 0.0003429Direct
    47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.01201Inherited
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.02853Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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