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Worm Phenotype (WP): necrotic cell death increased

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <4>
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + + 5:   blast cell physiology variant [WBPhenotype:0000985] <26>(152|154) (153|66|17)
+ + + + + 5:   cell physiology variant [WBPhenotype:0000536] <26>(152|154) (153|66|17)
+ + + + 4:   cell death variant [WBPhenotype:0000729] <3>(56|50) (57|16|5)
+ + + 3:   programmed cell death variant [WBPhenotype:0001172] <3>(54|47) (55|15|5)
+ + 2:   non apoptotic cell death variant [WBPhenotype:0001173] <2>(12|10) (12|4|1)
+ 1:   necrotic cell death variant [WBPhenotype:0000415] <1>(11|8) (11|3|1)
0:   necrotic cell death increased [WBPhenotype:0001397] <2>(10|8) (10|3|1)
- 1:   apoptosis increased [WBPhenotype:0000183] <2>(7|8) (7|3|1)
- 1:   gamete necrotic death increased [WBPhenotype:0002260](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
Cullin homology domain0.000000000001691Direct
Cullin repeat-like0.00000000005829Direct
POZ domain0.0000001317Direct
SET domain0.0000005202Direct
"Winged helix" DNA-binding domain0.00000362Direct
ARM repeat0.0002259Direct
Sm-like ribonucleoproteins0.000632Direct
Chromo domain-like0.0009516Direct
S-adenosyl-L-methionine-dependent methyltransferases0.004213Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Arginine methyltransferase0Direct
Skp1 dimerisation domain-like0Direct
Cullin repeat0Direct
SCF ubiquitin ligase complex WHB domain0Direct
Cullin homology domain0.000000000002855Direct
BTB/POZ domain0.000000000003677Direct
Ubiquitin activating enzymes (UBA)0.000001776Direct
Histone lysine methyltransferases0.000002052Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Skp1 dimerisation domain-like0Direct
Cullin homology domain0.000000000001343Direct
Cullin repeat-like0.00000000004644Direct
POZ domain0.0000001064Direct
SET domain0.000000422Direct
"Winged helix" DNA-binding domain0.00000296Direct
ARM repeat0.0001869Direct
Sm-like ribonucleoproteins0.0005271Direct
Chromo domain-like0.0007973Direct
S-adenosyl-L-methionine-dependent methyltransferases0.003581Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
75632,46785
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    54695,81382
  • 54695 - POZ domain
  • 81382 - Skp1 dimerisation domain-like
  • 0Direct
    74788,75632
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 0Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    74788,75632,46785
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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