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Worm Phenotype (WP): neuronal cell fate specification variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   physiology variant [WBPhenotype:0000519] <15>(509|582) (509|247|68)
+ + + 3:   development variant [WBPhenotype:0000518] <6>(507|580) (507|247|68)
+ + 2:   cell development variant [WBPhenotype:0000529] <17>(120|122) (121|48|12)
+ 1:   cell fate specification variant [WBPhenotype:0000216] <7>(21|18) (22|5|1)
0:   neuronal cell fate specification variant [WBPhenotype:0001510] <4>(9|6) (9|2|0)
- 1:   dopaminergic fate atypical [WBPhenotype:0001964](0|0) (0|0|0)
- 1:   loss of asymmetry ASE [WBPhenotype:0001660](4|3) (4|1|0)
- 1:   loss of asymmetry AWC [WBPhenotype:0001661](0|0) (0|1|0)
- 1:   transdifferentiation defective [WBPhenotype:0002358](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
cAMP-binding domain-like0.000001553Direct
HLH, helix-loop-helix DNA-binding domain0.000004469Direct
Voltage-gated potassium channels0.000004523Direct
PYP-like sensor domain (PAS domain)0.000004679Direct
DEATH domain0.000008239Direct
Growth factor receptor domain0.00004183Direct
Homeodomain-like0.0002185Direct
Fibronectin type III0.2041Inherited
EGF/Laminin0.3941Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
cAMP-binding domain0.000002128Direct
HLH, helix-loop-helix DNA-binding domain0.000004512Direct
Growth factor receptor domain0.000004768Direct
Homeodomain0.00001798Direct
Voltage-gated potassium channels0.0004676Direct
I set domains0.0545Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
cAMP-binding domain-like0.000001262Direct
HLH, helix-loop-helix DNA-binding domain0.000003642Direct
Voltage-gated potassium channels0.000003687Direct
PYP-like sensor domain (PAS domain)0.000003815Direct
DEATH domain0.000006716Direct
Growth factor receptor domain0.00003426Direct
Homeodomain-like0.0001801Direct
Fibronectin type III0.1881Inherited
EGF/Laminin0.3735Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0001722Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.1114Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)