SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): nuclei enlarged

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + 3:   cell morphology variant [WBPhenotype:0000533] <10>(104|103) (106|55|17)
+ + 2:   cell component morphology variant [WBPhenotype:0002089] <17>(84|85) (84|42|9)
+ 1:   nuclear appearance variant [WBPhenotype:0001028] <7>(7|9) (7|4|0)
0:   nuclei enlarged [WBPhenotype:0001567](2|1) (2|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.000003282Direct
Nucleotidylyl transferase0.000123Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Class I aminoacyl-tRNA synthetases (RS), catalytic domain0.00003869Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases0.000002665Direct
Nucleotidylyl transferase0.0001008Direct

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52374,47323
  • 52374 - Nucleotidylyl transferase
  • 47323 - Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
  • 0.0000002992Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)