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Worm Phenotype (WP): nicotine response variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <2>
+ + + + + + 6:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + + 5:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + + 4:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + + 3:   organism environmental stimulus response variant [WBPhenotype:0000738] <15>(138|128) (139|57|18)
+ + 2:   chemical response variant [WBPhenotype:0000523] <17>(80|73) (81|30|9)
+ 1:   drug response variant [WBPhenotype:0000631] <27>(49|43) (50|15|2)
0:   nicotine response variant [WBPhenotype:0001573] <2>(10|9) (10|4|1)
- 1:   nicotine hypersensitive [WBPhenotype:0001202](4|4) (4|2|1)
- 1:   nicotine resistant [WBPhenotype:0001203](2|2) (2|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Troponin coil-coiled subunits0.00000006294Direct
Tubulin nucleotide-binding domain-like0.000000104Direct
Tubulin C-terminal domain-like0.0000001578Direct
Cystine-knot cytokines0.0002034Direct
Calcium ATPase, transmembrane domain M0.004053Inherited
Metal cation-transporting ATPase, ATP-binding domain N0.004053Inherited
Calcium ATPase, transduction domain A0.004053Inherited
HAD-like0.008832Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.1384Inherited
Nicotinic receptor ligand binding domain-like0.1552Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Tubulin, GTPase domain0.0000001766Direct
Tubulin, C-terminal domain0.0000002684Direct
Transforming growth factor (TGF)-beta0.0000005754Direct
Meta-cation ATPase, catalytic domain P0.0008391Direct
Calcium ATPase, transduction domain A0.002459Inherited
Metal cation-transporting ATPase, ATP-binding domain N0.002459Inherited
Calcium ATPase, transmembrane domain M0.004382Inherited
Nicotinic receptor ligand binding domain-like0.08902Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.08902Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Troponin coil-coiled subunits0.00000005038Direct
Tubulin nucleotide-binding domain-like0.00000008329Direct
Tubulin C-terminal domain-like0.0000001267Direct
Cystine-knot cytokines0.0001671Direct
Metal cation-transporting ATPase, ATP-binding domain N0.003433Inherited
Calcium ATPase, transmembrane domain M0.003433Inherited
Calcium ATPase, transduction domain A0.003433Inherited
HAD-like0.007577Inherited
Neurotransmitter-gated ion-channel transmembrane pore0.126Inherited
Nicotinic receptor ligand binding domain-like0.1417Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.00000008329Direct
    56784,81665
  • 56784 - HAD-like
  • 81665 - Calcium ATPase, transmembrane domain M
  • 0.003433Inherited
    81660,56784
  • 81660 - Metal cation-transporting ATPase, ATP-binding domain N
  • 56784 - HAD-like
  • 0.003433Inherited
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.126Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    81660,56784,81665
  • 81660 - Metal cation-transporting ATPase, ATP-binding domain N
  • 56784 - HAD-like
  • 81665 - Calcium ATPase, transmembrane domain M
  • 0.003433Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)