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Worm Phenotype (WP): male gonad development variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <4>
+ + + + 4:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + + 3:   organ system development variant [WBPhenotype:0000530] <10>(78|72) (80|31|12)
+ + 2:   reproductive system development variant [WBPhenotype:0000624] <10>(47|39) (48|20|8)
+ 1:   gonad development variant [WBPhenotype:0000691] <2>(18|15) (19|8|3)
0:   male gonad development variant [WBPhenotype:0001675] <3>(6|5) (6|3|1)
- 1:   extra linker cells [WBPhenotype:0002189](0|0) (0|0|0)
- 1:   linker cell absent [WBPhenotype:0001929](0|0) (0|0|0)
- 1:   male somatic gonad development variant [WBPhenotype:0002188](6|5) (6|3|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
GroEL equatorial domain-like0.000000479Direct
GroEL-intermediate domain like0.000000479Direct
GroEL apical domain-like0.0000009325Direct
Tubulin nucleotide-binding domain-like0.0003235Direct
Tubulin C-terminal domain-like0.0004128Direct
Nucleic acid-binding proteins0.0004339Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DNA replication initiator (cdc21/cdc54) N-terminal domain0.00000003995Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000213Direct
Group II chaperonin (CCT, TRIC), apical domain0.0000373Direct
Tubulin, GTPase domain0.0004485Direct
Tubulin, C-terminal domain0.0005726Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GroEL-intermediate domain like0.0000003883Direct
GroEL equatorial domain-like0.0000003883Direct
GroEL apical domain-like0.0000007586Direct
Tubulin nucleotide-binding domain-like0.0002683Direct
Tubulin C-terminal domain-like0.0003429Direct
Nucleic acid-binding proteins0.0003604Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000003883Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0000003883Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0002683Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000003883Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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