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Worm Phenotype (WP): unfolded protein response variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + 4:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + + 4:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + 3:   cell physiology variant [WBPhenotype:0000536] <36>(149|149) (150|64|19)
+ + + 3:   organism metabolism processing variant [WBPhenotype:0000027] <25>(178|190) (182|87|26)
+ + + 3:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + 2:   organism environmental stimulus response variant [WBPhenotype:0000738] <15>(138|128) (139|57|18)
+ + 2:   cell homeostasis metabolism variant [WBPhenotype:0000585] <12>(60|54) (60|23|12)
+ + 2:   metabolic pathway variant [WBPhenotype:0000463] <8>(39|32) (39|15|9)
+ + 2:   organism stress response variant [WBPhenotype:0000067] <20>(75|63) (76|26|7)
+ 1:   chemical response variant [WBPhenotype:0000523] <17>(80|73) (81|30|9)
+ 1:   cell stress response variant [WBPhenotype:0000142] <12>(20|17) (20|7|3)
+ 1:   protein metabolism variant [WBPhenotype:0001644] <9>(30|26) (30|15|8)
0:   unfolded protein response variant [WBPhenotype:0001719](6|5) (6|4|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
GroEL-intermediate domain like0.000000000149Direct
GroEL equatorial domain-like0.000000000149Direct
GroEL apical domain-like0.0000000003677Direct
Lipovitellin-phosvitin complex, superhelical domain0.0000000682Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.0000000682Direct
Sm-like ribonucleoproteins0.00005388Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Group II chaperonin (CCT, TRIC), ATPase domain0.00000002117Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.00000003592Direct
Group II chaperonin (CCT, TRIC), apical domain0.00000004692Direct
Lipovitellin-phosvitin complex, superhelical domain0.00000005475Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00000005475Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GroEL equatorial domain-like0.000000000118Direct
GroEL-intermediate domain like0.000000000118Direct
GroEL apical domain-like0.0000000002916Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.00000005458Direct
Lipovitellin-phosvitin complex, superhelical domain0.00000005458Direct
Sm-like ribonucleoproteins0.0000441Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.000000000118Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000000000118Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0.00000005458Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.00000005458Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.000000000118Direct
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.00000005458Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)