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Worm Phenotype (WP): unfolded protein response variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + 5:   Variant [WBPhenotype:0000886] <4>
+ + + + 4:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
+ + + + 4:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + 3:   organism metabolism processing variant [WBPhenotype:0000027] <25>(171|182) (175|80|24)
+ + + 3:   blast cell physiology variant [WBPhenotype:0000985] <26>(152|154) (153|66|17)
+ + + 3:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(346|406) (348|189|55)
+ + + 3:   cell physiology variant [WBPhenotype:0000536] <26>(152|154) (153|66|17)
+ + 2:   cell homeostasis metabolism variant [WBPhenotype:0000585] <12>(65|61) (65|26|11)
+ + 2:   metabolic pathway variant [WBPhenotype:0000463] <8>(35|28) (35|16|8)
+ + 2:   organism environmental stimulus response variant [WBPhenotype:0000738] <16>(115|103) (118|51|16)
+ 1:   protein metabolism variant [WBPhenotype:0001644] <10>(28|24) (28|15|8)
+ 1:   cell stress response variant [WBPhenotype:0000142] <12>(28|24) (28|9|3)
+ 1:   chemical response variant [WBPhenotype:0000523] <11>(65|58) (66|25|6)
0:   unfolded protein response variant [WBPhenotype:0001719](6|5) (6|4|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
GroEL equatorial domain-like0.0000000001205Direct
GroEL-intermediate domain like0.0000000001205Direct
GroEL apical domain-like0.0000000002975Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.000002081Direct
Lipovitellin-phosvitin complex, superhelical domain0.000002081Direct
Sm-like ribonucleoproteins0.00004706Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Group II chaperonin (CCT, TRIC), ATPase domain0.00000001861Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.00000003242Direct
Group II chaperonin (CCT, TRIC), apical domain0.00000004128Direct
Lipovitellin-phosvitin complex, superhelical domain0.000001627Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.000001627Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GroEL-intermediate domain like0.00000000009607Direct
GroEL equatorial domain-like0.00000000009607Direct
GroEL apical domain-like0.0000000002375Direct
Lipovitellin-phosvitin complex; beta-sheet shell regions0.000001698Direct
Lipovitellin-phosvitin complex, superhelical domain0.000001698Direct
Sm-like ribonucleoproteins0.00003877Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000009607Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00000000009607Direct
    56968,48431
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 0.000001698Direct
    48431,56968
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.000001698Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00000000009607Direct
    56968,48431,56968
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 48431 - Lipovitellin-phosvitin complex, superhelical domain
  • 56968 - Lipovitellin-phosvitin complex; beta-sheet shell regions
  • 0.000001698Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)