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Worm Phenotype (WP): mitosis variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + 3:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <36>(149|149) (150|64|19)
+ 1:   cell division variant [WBPhenotype:0000746] <19>(51|54) (52|20|4)
0:   mitosis variant [WBPhenotype:0001743] <8>(10|12) (10|4|1)
- 1:   mitotic chromosome segregation variant [WBPhenotype:0001378] <2>(2|3) (2|0|0)
- 1:   chromosome condensation variant [WBPhenotype:0001361] <1>(7|8) (7|3|1)
- 1:   chromosome decondensation variant [WBPhenotype:0002061] <1>(0|0) (0|0|0)
- 1:   G1 checkpoint variant [WBPhenotype:0000873](0|0) (0|0|0)
- 1:   G2 checkpoint variant [WBPhenotype:0000874](0|0) (0|0|0)
- 1:   S phase checkpoint variant [WBPhenotype:0000875](0|0) (0|0|0)
- 1:   mitotic chromatin remodeling variant [WBPhenotype:0002161](0|0) (0|0|0)
- 1:   multipolar mitotic spindle [WBPhenotype:0002162](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
F1F0 ATP synthase subunit C0.000005047Direct
Tubulin C-terminal domain-like0.0006027Direct
Tubulin nucleotide-binding domain-like0.0006027Direct
SNARE-like0.008575Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0316Inherited
Histone-fold0.0516Inherited
Smc hinge domain0.06799Inherited
GroEL-intermediate domain like0.119Inherited
GroEL equatorial domain-like0.119Inherited
GroEL apical domain-like0.119Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
F1F0 ATP synthase subunit C0.000008184Direct
Nitrogenase iron protein-like0.0004224Direct
Tubulin, GTPase domain0.0005244Direct
Tubulin, C-terminal domain0.0005244Direct
Proteasome subunits0.01847Inherited
Smc hinge domain0.02767Inherited
RecA protein-like (ATPase-domain)0.02767Inherited
Nucleosome core histones0.04509Inherited
Sm motif of small nuclear ribonucleoproteins, SNRNP0.06247Inherited
Group II chaperonin (CCT, TRIC), apical domain0.1112Inherited
Group II chaperonin (CCT, TRIC), ATPase domain0.1112Inherited
ABC transporter ATPase domain-like0.3886Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
F1F0 ATP synthase subunit C0.000004103Direct
Tubulin C-terminal domain-like0.0004993Direct
Tubulin nucleotide-binding domain-like0.0004993Direct
SNARE-like0.007353Inherited
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.02777Inherited
Histone-fold0.04578Inherited
Smc hinge domain0.06071Inherited
GroEL equatorial domain-like0.1079Inherited
GroEL apical domain-like0.1079Inherited
GroEL-intermediate domain like0.1079Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.0000008592Direct
    52490,55307
  • 52490 - Tubulin nucleotide-binding domain-like
  • 55307 - Tubulin C-terminal domain-like
  • 0.0004993Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.1079Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.1079Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.1079Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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