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Worm Phenotype (WP): carbon dioxide avoidance variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <4>
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + 4:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
+ + + 3:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(346|406) (348|189|55)
+ + 2:   organism environmental stimulus response variant [WBPhenotype:0000738] <16>(115|103) (118|51|16)
+ 1:   carbon dioxide response variant [WBPhenotype:0001764] <1>(8|7) (8|1|0)
0:   carbon dioxide avoidance variant [WBPhenotype:0001765](7|6) (7|1|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Ligand-binding domain in the NO signalling and Golgi transport0.000000000001616Direct
P-loop containing nucleoside triphosphate hydrolases0.0000000286Direct
cAMP-binding domain-like0.0000003205Direct
PYP-like sensor domain (PAS domain)0.000001317Direct
Periplasmic binding protein-like I0.000004841Direct
Homeodomain-like0.00006174Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
G proteins0.000000000000008148Direct
H-NOX domain0.00000004924Direct
cAMP-binding domain0.0000006649Direct
Pyridoxal-dependent decarboxylase0.000005563Direct
Homeodomain0.00001654Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Ligand-binding domain in the NO signalling and Golgi transport0.000000000001282Direct
P-loop containing nucleoside triphosphate hydrolases0.00000002303Direct
cAMP-binding domain-like0.0000002596Direct
PYP-like sensor domain (PAS domain)0.000001073Direct
Periplasmic binding protein-like I0.000003959Direct
Homeodomain-like0.00005088Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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