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Worm Phenotype (WP): body wall muscle sarcomere morphology variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <4>
+ + + + + 5:   cell morphology variant [WBPhenotype:0000533] <11>(104|105) (106|54|17)
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <9>(440|519) (440|228|63)
+ + + + 4:   cell type morphology variant [WBPhenotype:0002108] <12>(79|80) (81|44|15)
+ + + + 4:   organ system morphology variant [WBPhenotype:0000534] <9>(98|101) (99|48|16)
+ + + 3:   muscle system morphology variant [WBPhenotype:0000603] <2>(21|23) (21|16|5)
+ + + 3:   muscle cell morphology variant [WBPhenotype:0000904] <4>(23|27) (23|16|6)
+ + 2:   striated muscle morphology variant [WBPhenotype:0000924] <2>(20|23) (20|16|5)
+ 1:   body wall muscle morphology variant [WBPhenotype:0000926] <3>(19|21) (19|15|4)
0:   body wall muscle sarcomere morphology variant [WBPhenotype:0001889] <4>(19|21) (19|15|4)
- 1:   M line variant [WBPhenotype:0001891] <1>(0|0) (0|0|0)
- 1:   body wall muscle thick filament variant [WBPhenotype:0000782] <1>(5|3) (5|2|1)
- 1:   body wall muscle thin filament variant [WBPhenotype:0000781] <1>(0|0) (0|0|0)
- 1:   body wall muscle dense body variant [WBPhenotype:0001890](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Integrin domains0Direct
SH3-domain0.000000000008095Direct
SH2 domain0.00000002319Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00000006068Direct
Calpain large subunit, middle domain (domain III)0.0000002031Direct
Myosin rod fragments0.00002184Direct
Immunoglobulin0.00003044Direct
Fibronectin type III0.00005836Direct
Second domain of FERM0.0000598Direct
Tropomyosin0.00007278Direct
DBL homology domain (DH-domain)0.00008607Direct
Growth factor receptor domain0.00008687Direct
Voltage-gated potassium channels0.0002492Direct
Troponin coil-coiled subunits0.0003107Direct
Cysteine-rich domain0.0004243Direct
EGF/Laminin0.0005686Direct
Actin-like ATPase domain0.00485Inherited
Glutathione synthetase ATP-binding domain-like0.01658Inherited
Calponin-homology domain, CH-domain0.6815Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Integrin domains0Direct
SH3-domain0.00000000009981Direct
Pleckstrin-homology domain (PH domain)0.0000000002839Direct
LIM domain0.00000007342Direct
SH2 domain0.0000001628Direct
Calpain large subunit, middle domain (domain III)0.0000004115Direct
I set domains0.000001397Direct
Calpain large subunit, catalytic domain (domain II)0.00003259Direct
Myosin rod fragments0.00003722Direct
Third domain of FERM0.00007056Direct
Second domain of FERM0.0000788Direct
Laminin-type module0.0001087Direct
First domain of FERM0.0001087Direct
Tropomyosin0.0001229Direct
PLC-like (P variant)0.0001229Direct
Fibronectin type III0.0001632Direct
DBL homology domain (DH-domain)0.0001661Direct
Lamin A/C globular tail domain0.0007697Direct
Synaptotagmin-like (S variant)0.0009048Direct
Actin/HSP700.000908Direct
Calponin-homology domain, CH-domain0.6229Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Integrin domains0Direct
SH3-domain0.000000000006437Direct
SH2 domain0.00000001867Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00000004894Direct
Calpain large subunit, middle domain (domain III)0.0000001642Direct
Myosin rod fragments0.00001793Direct
Immunoglobulin0.00002502Direct
Fibronectin type III0.00004809Direct
Second domain of FERM0.00004928Direct
Tropomyosin0.00005997Direct
DBL homology domain (DH-domain)0.00007101Direct
Growth factor receptor domain0.00007167Direct
Voltage-gated potassium channels0.0002064Direct
Troponin coil-coiled subunits0.0002576Direct
Cysteine-rich domain0.0003524Direct
EGF/Laminin0.0004735Direct
Actin-like ATPase domain0.004128Inherited
Glutathione synthetase ATP-binding domain-like0.01436Inherited
Calponin-homology domain, CH-domain0.6605Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.0000000007353Direct
    54001,49758
  • 54001 - Cysteine proteinases
  • 49758 - Calpain large subunit, middle domain (domain III)
  • 0.00000004299Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.000001868Direct
    55550,50044
  • 55550 - SH2 domain
  • 50044 - SH3-domain
  • 0.000004618Direct
    47031,50729
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.000008085Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.00001615Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.00004928Direct
    50044,55550
  • 50044 - SH3-domain
  • 55550 - SH2 domain
  • 0.0001358Direct
    64593,74853
  • 64593 - Intermediate filament protein, coiled coil region
  • 74853 - Lamin A/C globular tail domain
  • 0.0001358Direct
    50044,50044
  • 50044 - SH3-domain
  • 50044 - SH3-domain
  • 0.0001358Direct
    90257,90257
  • 90257 - Myosin rod fragments
  • 90257 - Myosin rod fragments
  • 0.0001358Direct
    54236,47031
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 0.0001526Direct
    48065,50729
  • 48065 - DBL homology domain (DH-domain)
  • 50729 - PH domain-like
  • 0.0001526Direct
    49265,49265
  • 49265 - Fibronectin type III
  • 49265 - Fibronectin type III
  • 0.0002576Direct
    53067,53067
  • 53067 - Actin-like ATPase domain
  • 53067 - Actin-like ATPase domain
  • 0.001964Inherited

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57716,57716,57716
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 57716 - Glucocorticoid receptor-like (DNA-binding domain)
  • 0.00000000007337Direct
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.000004756Direct
    48726,48726,49265
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.00003423Direct
    54236,47031,50729
  • 54236 - Ubiquitin-like
  • 47031 - Second domain of FERM
  • 50729 - PH domain-like
  • 0.00009832Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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