SUPERFAMILY 1.75 HMM library and genome assignments server

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Worm Phenotype (WP): muscle arm development defective

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <4>
+ + + + + 5:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ + + + 4:   cell development variant [WBPhenotype:0000529] <17>(128|124) (129|49|15)
+ + + 3:   muscle cell development variant [WBPhenotype:0000815] <1>(8|9) (9|3|1)
+ + 2:   body wall cell development variant [WBPhenotype:0000087] <2>(8|9) (9|3|1)
+ 1:   muscle arm development variant [WBPhenotype:0000540] <2>(7|8) (8|3|1)
0:   muscle arm development defective [WBPhenotype:0001930](6|6) (6|3|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Immunoglobulin0.0000000002597Direct
Protein kinase-like (PK-like)0.0000000008635Direct
Fibronectin type III0.00000000501Direct
EGF/Laminin0.000003579Direct
Growth factor receptor domain0.00002145Direct
Concanavalin A-like lectins/glucanases0.0009628Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Laminin-type module0.0000000001586Direct
I set domains0.000000004145Direct
Protein kinases, catalytic subunit0.00000000455Direct
Fibronectin type III0.00000002682Direct
Growth factor receptor domain0.000004993Direct
Motor proteins0.0000101Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Immunoglobulin0.0000000002073Direct
Protein kinase-like (PK-like)0.0000000006902Direct
Fibronectin type III0.000000004019Direct
EGF/Laminin0.000002926Direct
Growth factor receptor domain0.00001761Direct
Concanavalin A-like lectins/glucanases0.0008068Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.0000006861Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.000002736Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.000003012Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57196,57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.00000001903Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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