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Worm Phenotype (WP): rachis narrow

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <4>
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <9>(440|519) (440|228|63)
+ + + + 4:   organ system morphology variant [WBPhenotype:0000534] <9>(98|101) (99|48|16)
+ + + 3:   reproductive system morphology variant [WBPhenotype:0000605] <5>(49|49) (51|18|6)
+ + 2:   gonad morphology variant [WBPhenotype:0001355] <10>(29|29) (29|9|2)
+ 1:   rachis morphology variant [WBPhenotype:0001940] <4>(15|14) (15|6|2)
0:   rachis narrow [WBPhenotype:0001941](10|8) (10|3|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000000009302Direct
GroEL equatorial domain-like0.0000000002993Direct
GroEL-intermediate domain like0.0000000002993Direct
GroEL apical domain-like0.0000000009734Direct
Translation proteins SH3-like domain0.000000006106Direct
L30e-like0.000001957Direct
Ribosomal proteins S24e, L23 and L15e0.000003737Direct
S15/NS1 RNA-binding domain0.000003737Direct
Translational machinery components0.00001077Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.00008096Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000000001834Direct
Group II chaperonin (CCT, TRIC), apical domain0.0000000008011Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.000001217Direct
Cold shock DNA-binding domain-like0.000003642Direct
L30e/L7ae ribosomal proteins0.000005799Direct
Clathrin adaptor core protein0.00003742Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.000125Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000000007375Direct
GroEL-intermediate domain like0.0000000002389Direct
GroEL equatorial domain-like0.0000000002389Direct
GroEL apical domain-like0.0000000007783Direct
Translation proteins SH3-like domain0.000000004899Direct
L30e-like0.000001597Direct
S15/NS1 RNA-binding domain0.000003056Direct
Ribosomal proteins S24e, L23 and L15e0.000003056Direct
Translational machinery components0.000008814Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.00006677Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000000002389Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0000000002389Direct
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.00006677Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000000002389Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.00006677Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)