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Worm Phenotype (WP): rachis narrow

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   morphology variant [WBPhenotype:0000520] <5>(443|528) (444|229|63)
+ + + + 4:   organ system morphology variant [WBPhenotype:0000534] <9>(99|104) (101|47|17)
+ + + 3:   reproductive system morphology variant [WBPhenotype:0000605] <5>(49|49) (50|17|6)
+ + 2:   gonad morphology variant [WBPhenotype:0001355] <10>(29|29) (29|9|2)
+ 1:   rachis morphology variant [WBPhenotype:0001940] <4>(15|14) (15|6|2)
0:   rachis narrow [WBPhenotype:0001941](10|8) (10|3|2)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000000009313Direct
GroEL-intermediate domain like0.0000000003001Direct
GroEL equatorial domain-like0.0000000003001Direct
GroEL apical domain-like0.0000000009759Direct
Translation proteins SH3-like domain0.000000006118Direct
L30e-like0.000001963Direct
Ribosomal proteins S24e, L23 and L15e0.000003751Direct
S15/NS1 RNA-binding domain0.000003751Direct
Translational machinery components0.00001078Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.00008111Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.0000000001819Direct
Group II chaperonin (CCT, TRIC), apical domain0.0000000007949Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.000001209Direct
Cold shock DNA-binding domain-like0.000003607Direct
L30e/L7ae ribosomal proteins0.000005754Direct
Clathrin adaptor core protein0.00003714Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.000124Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000000007333Direct
GroEL equatorial domain-like0.0000000002379Direct
GroEL-intermediate domain like0.0000000002379Direct
GroEL apical domain-like0.0000000007749Direct
Translation proteins SH3-like domain0.000000004875Direct
L30e-like0.00000159Direct
Ribosomal proteins S24e, L23 and L15e0.000003047Direct
S15/NS1 RNA-binding domain0.000003047Direct
Translational machinery components0.000008771Direct
EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain0.00006638Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0000000002379Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000000002379Direct
    50447,50465
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.00006638Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000000002379Direct
    52540,50447,50465
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 50447 - Translation proteins
  • 50465 - EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain
  • 0.00006638Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)