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Worm Phenotype (WP): germ cell compartment anucleate

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <4>
+ + + + + + 6:   morphology variant [WBPhenotype:0000520] <9>(440|519) (440|228|63)
+ + + + + 5:   cell morphology variant [WBPhenotype:0000533] <11>(104|105) (106|54|17)
+ + + + 4:   cell type morphology variant [WBPhenotype:0002108] <12>(79|80) (81|44|15)
+ + + 3:   germ cell morphology variant [WBPhenotype:0000900] <4>(45|41) (46|22|8)
+ + 2:   germ cell compartment morphology variant [WBPhenotype:0001969] <4>(25|26) (25|10|2)
+ 1:   germ cell compartment nuclei number variant [WBPhenotype:0001970] <2>(6|9) (6|3|1)
0:   germ cell compartment anucleate [WBPhenotype:0001971](5|7) (5|3|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
GroEL equatorial domain-like0.00000003737Direct
GroEL-intermediate domain like0.00000003737Direct
GroEL apical domain-like0.00000007367Direct
F1F0 ATP synthase subunit C0.0000001553Direct
Class II aaRS and biotin synthetases0.0001153Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Group II chaperonin (CCT, TRIC), ATPase domain0.00000003754Direct
Group II chaperonin (CCT, TRIC), intermediate domain0.00000005697Direct
Group II chaperonin (CCT, TRIC), apical domain0.00000008302Direct
F1F0 ATP synthase subunit C0.0000002785Direct
RecA protein-like (ATPase-domain)0.0000008145Direct
Extended AAA-ATPase domain0.00002737Direct
Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain0.0001329Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
GroEL-intermediate domain like0.0000000301Direct
GroEL equatorial domain-like0.0000000301Direct
GroEL apical domain-like0.00000005943Direct
F1F0 ATP synthase subunit C0.0000001255Direct
Class II aaRS and biotin synthetases0.00009521Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
81333,81333
  • 81333 - F1F0 ATP synthase subunit C
  • 81333 - F1F0 ATP synthase subunit C
  • 0.00000002569Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000000301Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.0000000301Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.0000000301Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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