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Worm Phenotype (WP): cell cycle progression variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <4>
+ + + 3:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <26>(152|154) (153|66|17)
+ + 2:   blast cell physiology variant [WBPhenotype:0000985] <26>(152|154) (153|66|17)
+ 1:   cell cycle variant [WBPhenotype:0000740] <5>(8|10) (8|4|1)
0:   cell cycle progression variant [WBPhenotype:0001995] <4>(6|9) (6|3|1)
- 1:   cell cycle arrest [WBPhenotype:0001392] <1>(4|5) (4|0|0)
- 1:   cell cycle delayed [WBPhenotype:0000318](0|0) (0|0|0)
- 1:   cell cycle quiescence variant [WBPhenotype:0001996](0|0) (0|0|0)
- 1:   early exit cell cycle [WBPhenotype:0000169](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000002566Direct
Cullin homology domain0.0000006124Direct
Cullin repeat-like0.000002122Direct
UBC-like0.0006199Direct
Nucleotide-diphospho-sugar transferases0.003205Inherited
P-loop containing nucleoside triphosphate hydrolases1Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Proteasome subunits0.00000000006792Direct
Cullin repeat0.0000003317Direct
SCF ubiquitin ligase complex WHB domain0.0000003317Direct
Cullin homology domain0.0000007578Direct
Cyclin0.000001625Direct
UBC-related0.0002855Direct
Tetratricopeptide repeat (TPR)0.001269Inherited
Motor proteins0.0187Inherited
Extended AAA-ATPase domain0.5248Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0000000002048Direct
Cullin homology domain0.0000004972Direct
Cullin repeat-like0.000001732Direct
UBC-like0.0005168Direct
Nucleotide-diphospho-sugar transferases0.002716Inherited
P-loop containing nucleoside triphosphate hydrolases1Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
75632,46785
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0000002169Direct
    74788,75632
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 0.0000002169Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.00001278Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    74788,75632,46785
  • 74788 - Cullin repeat-like
  • 75632 - Cullin homology domain
  • 46785 - "Winged helix" DNA-binding domain
  • 0.0000002169Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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