SUPERFAMILY 1.75 HMM library and genome assignments server

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Worm Phenotype (WP): basement membrane remodeling variant

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + 3:   Variant [WBPhenotype:0000886] <4>
+ + 2:   development variant [WBPhenotype:0000518] <7>(506|577) (506|246|68)
+ 1:   pericellular component development variant [WBPhenotype:0000200] <4>(30|38) (30|15|5)
0:   basement membrane remodeling variant [WBPhenotype:0002065] <1>(25|35) (25|15|5)
- 1:   basement membrane gap expansion variant [WBPhenotype:0002066](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
BPTI-like0Direct
Carboxypeptidase regulatory domain-like0Direct
Zn-dependent exopeptidases0Direct
Blood coagulation inhibitor (disintegrin)0Direct
PGBD-like0Direct
Acid proteases8.918e-16Direct
Cysteine proteinases0.000000000000005785Direct
alpha/beta-Hydrolases0.00000000000003193Direct
Protease propeptides/inhibitors0.000000000001055Direct
Creatinase/aminopeptidase0.00000000003303Direct
Trypsin-like serine proteases0.0000000003953Direct
TSP-1 type 1 repeat0.00000001332Direct
Subtilisin-like0.0000000426Direct
Bacterial exopeptidase dimerisation domain0.0000000426Direct
Serine protease inhibitors0.00000004291Direct
Metalloproteases ("zincins"), catalytic domain0.0000002315Direct
Hemopexin-like domain0.0000002447Direct
Spermadhesin, CUB domain0.0000005039Direct
LuxS/MPP-like metallohydrolase0.0000008511Direct
Integrin domains0.000001561Direct
Serpins0.000004175Direct
Leukotriene A4 hydrolase N-terminal domain0.000009689Direct
Thyroglobulin type-1 domain0.00002117Direct
beta-lactamase/transpeptidase-like0.00002572Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0002101Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
DPP6 catalytic domain-like0Direct
Acylamino-acid-releasing enzyme, C-terminal donain0Direct
Blood coagulation inhibitor (disintegrin)0Direct
Papain-like0Direct
Proprotein convertase P-domain0Direct
Integrin domains0Direct
Small Kunitz-type inhibitors & BPTI-like toxins0Direct
Astacin0Direct
Neutral endopeptidase (neprilysin)0Direct
Methionine aminopeptidase, insert domain0Direct
Carboxypeptidase regulatory domain0Direct
DPP6 N-terminal domain-like0Direct
Matrix metalloproteases, catalytic domain0Direct
Pepsin-like6.282e-16Direct
Pancreatic carboxypeptidases0.0000000000003229Direct
Reprolysin-like0.000000000004571Direct
Bacterial dinuclear zinc exopeptidases0.00000000003974Direct
Creatinase/aminopeptidase0.0000000001916Direct
Serine carboxypeptidase-like0.000000001035Direct
TSP-1 type 1 repeat0.0000001139Direct
Subtilases0.0000001143Direct
Bacterial exopeptidase dimerisation domain0.0000001143Direct
Hemopexin-like domain0.0000006541Direct
Pancreatic carboxypeptidase, activation domain0.000002185Direct
MPP-like0.000002857Direct
Eukaryotic proteases0.000005563Direct
Serpins0.00000858Direct
ATI-like0.00001198Direct
beta-Lactamase/D-ala carboxypeptidase0.00001198Direct
Spermadhesin, CUB domain0.00001866Direct
Leukotriene A4 hydrolase N-terminal domain0.00004044Direct
Leukotriene A4 hydrolase catalytic domain0.00004044Direct
Thyroglobulin type-1 domain0.00004374Direct
Gamma-glutamyltranspeptidase-like0.00004374Direct
Acetylcholinesterase-like0.0001125Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Zn-dependent exopeptidases0Direct
PGBD-like0Direct
BPTI-like0Direct
Blood coagulation inhibitor (disintegrin)0Direct
Carboxypeptidase regulatory domain-like0Direct
Acid proteases7.036e-16Direct
Cysteine proteinases0.000000000000004565Direct
alpha/beta-Hydrolases0.00000000000002523Direct
Protease propeptides/inhibitors0.0000000000008369Direct
Creatinase/aminopeptidase0.0000000000263Direct
Trypsin-like serine proteases0.0000000003156Direct
TSP-1 type 1 repeat0.0000000107Direct
Bacterial exopeptidase dimerisation domain0.00000003434Direct
Subtilisin-like0.00000003434Direct
Serine protease inhibitors0.00000003459Direct
Metalloproteases ("zincins"), catalytic domain0.0000001873Direct
Hemopexin-like domain0.000000198Direct
Spermadhesin, CUB domain0.0000004086Direct
LuxS/MPP-like metallohydrolase0.0000006922Direct
Integrin domains0.000001273Direct
Serpins0.000003413Direct
Leukotriene A4 hydrolase N-terminal domain0.000007931Direct
Thyroglobulin type-1 domain0.00001737Direct
beta-lactamase/transpeptidase-like0.00002112Direct
N-terminal nucleophile aminohydrolases (Ntn hydrolases)0.0001737Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
55920,46785
  • 55920 - Creatinase/aminopeptidase
  • 46785 - "Winged helix" DNA-binding domain
  • 0Direct
    55486,57552
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 57552 - Blood coagulation inhibitor (disintegrin)
  • 0Direct
    47090,55486
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0Direct
    55486,50923
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0Direct
    55486,49854
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 49854 - Spermadhesin, CUB domain
  • 0Direct
    52743,49785
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0Direct
    54897,52743
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
  • 0Direct
    53187,49464
  • 53187 - Zn-dependent exopeptidases
  • 49464 - Carboxypeptidase regulatory domain-like
  • 0Direct
    57362,57362
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 0.00000000000001613Direct
    82171,53474
  • 82171 - DPP6 N-terminal domain-like
  • 53474 - alpha/beta-Hydrolases
  • 0.0000000009073Direct
    82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.000000002608Direct
    54897,53187
  • 54897 - Protease propeptides/inhibitors
  • 53187 - Zn-dependent exopeptidases
  • 0.0000000238Direct
    53187,55031
  • 53187 - Zn-dependent exopeptidases
  • 55031 - Bacterial exopeptidase dimerisation domain
  • 0.00000003434Direct
    63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.0000006922Direct
    63737,55486
  • 63737 - Leukotriene A4 hydrolase N-terminal domain
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 0.000003413Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    54897,52743,49785
  • 54897 - Protease propeptides/inhibitors
  • 52743 - Subtilisin-like
  • 49785 - Galactose-binding domain-like
  • 0Direct
    47090,55486,50923
  • 47090 - PGBD-like
  • 55486 - Metalloproteases ("zincins"), catalytic domain
  • 50923 - Hemopexin-like domain
  • 0Direct
    57362,57362,57362
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 57362 - BPTI-like
  • 0Direct
    82895,82895,82895
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 82895 - TSP-1 type 1 repeat
  • 0.000000002608Direct
    63411,63411,63411
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 63411 - LuxS/MPP-like metallohydrolase
  • 0.000006057Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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