SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Worm Phenotype (WP): eggshell formation variant

(show info)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + 3:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + 3:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + 2:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + 2:   cell physiology variant [WBPhenotype:0000536] <36>(149|149) (150|64|19)
+ 1:   cell secretion variant [WBPhenotype:0000258] <6>(7|8) (7|1|0)
+ 1:   osmotic integrity variant [WBPhenotype:0000041] <2>(6|7) (6|1|0)
0:   eggshell formation variant [WBPhenotype:0002075] <2>(2|1) (2|0|0)
- 1:   egg integrity defective early emb [WBPhenotype:0001178] <2>(2|1) (2|0|0)
- 1:   cortical granule exocytosis variant [WBPhenotype:0002076](0|0) (0|0|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Invertebrate chitin-binding proteins0.0000189Direct
Multidrug efflux transporter AcrB transmembrane domain0.7661Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

(show details)
SCOP termFDR (all)Annotation (direct or inherited)
Multidrug efflux transporter AcrB transmembrane domain0.6794Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)

Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

(show details)
Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Invertebrate chitin-binding proteins0.00001541Direct
Multidrug efflux transporter AcrB transmembrane domain0.7469Inherited


Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
Plot tree as:   Download Newick format tree:
(show help)