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Worm Phenotype (WP): cell number variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + 4:   Variant [WBPhenotype:0000886] <2>
+ + + 3:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + 2:   development variant [WBPhenotype:0000518] <6>(508|585) (508|248|68)
+ 1:   organism development variant [WBPhenotype:0000531] <10>(505|583) (505|248|68)
0:   cell number variant [WBPhenotype:0002173] <2>(24|25) (24|6|1)
- 1:   cell number increased [WBPhenotype:0002175] <17>(17|21) (18|6|1)
- 1:   cell number decreased [WBPhenotype:0002174] <14>(7|9) (7|1|0)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
ArfGap/RecO-like zinc finger0Direct
RNA-binding domain, RBD0.000000000000004033Direct
Sm-like ribonucleoproteins0.000000000001973Direct
Homeodomain-like0.0000001204Direct
beta-beta-alpha zinc fingers0.000000265Direct
CCCH zinc finger0.0000002986Direct
Sec7 domain0.0000004971Direct
ARM repeat0.0000007765Direct
KA1-like0.000002783Direct
EGF/Laminin0.000004321Direct
Frizzled cysteine-rich domain0.00005076Direct
Retrovirus zinc finger-like domains0.00006732Direct
WD40 repeat-like0.0002092Direct
Cyclin-like0.0003988Direct
"Winged helix" DNA-binding domain0.0007645Direct
Bromodomain0.0008331Direct
P-loop containing nucleoside triphosphate hydrolases0.0009567Direct
SET domain0.00162Inherited
Protein kinase-like (PK-like)0.006675Inherited
Ubiquitin-like0.01584Inherited
Acyl-CoA N-acyltransferases (Nat)0.03363Inherited
PH domain-like0.06161Inherited
BPTI-like0.1116Inherited
PDZ domain-like0.217Inherited


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Pyk2-associated protein beta ARF-GAP domain0Direct
Mo25 protein0Direct
Canonical RBD0.000000000000007503Direct
Sm motif of small nuclear ribonucleoproteins, SNRNP0.00000000008337Direct
Sec7 domain0.0000009005Direct
CCCH zinc finger0.000001178Direct
Homeodomain0.000002661Direct
Paired domain0.000007781Direct
Cyclin0.00004208Direct
DEP domain0.00007715Direct
Frizzled cysteine-rich domain0.00007715Direct
Growth factor receptor domain0.0001384Direct
Retrovirus zinc finger-like domains0.0001384Direct
WD40-repeat0.0002795Direct
N-acetyl transferase, NAT0.0003047Direct
Histone lysine methyltransferases0.0003047Direct
Armadillo repeat0.0004538Direct
Classic zinc finger, C2H20.0005627Direct
Bromodomain0.001441Inherited
Pumilio repeat0.002322Inherited
Protein kinases, catalytic subunit0.01294Inherited
Pleckstrin-homology domain (PH domain)0.01719Inherited
G proteins0.07086Inherited
Small Kunitz-type inhibitors & BPTI-like toxins0.09508Inherited
PDZ domain0.1244Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
ArfGap/RecO-like zinc finger0Direct
RNA-binding domain, RBD0.000000000000003161Direct
Sm-like ribonucleoproteins0.000000000001555Direct
Homeodomain-like0.00000009651Direct
beta-beta-alpha zinc fingers0.0000002131Direct
CCCH zinc finger0.0000002401Direct
Sec7 domain0.0000004005Direct
ARM repeat0.0000006267Direct
KA1-like0.000002257Direct
EGF/Laminin0.00000351Direct
Frizzled cysteine-rich domain0.00004153Direct
Retrovirus zinc finger-like domains0.00005507Direct
WD40 repeat-like0.0001719Direct
Cyclin-like0.0003291Direct
"Winged helix" DNA-binding domain0.0006353Direct
Bromodomain0.000693Direct
P-loop containing nucleoside triphosphate hydrolases0.000796Direct
SET domain0.001354Inherited
Protein kinase-like (PK-like)0.005692Inherited
Ubiquitin-like0.01374Inherited
Acyl-CoA N-acyltransferases (Nat)0.02958Inherited
PH domain-like0.05488Inherited
BPTI-like0.101Inherited
PDZ domain-like0.2005Inherited

(show details)
Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57863,48403
  • 57863 - ArfGap/RecO-like zinc finger
  • 48403 - Ankyrin repeat
  • 0Direct
    57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.0000002628Direct
    47954,47954
  • 47954 - Cyclin-like
  • 47954 - Cyclin-like
  • 0.00003471Direct
    54928,54928
  • 54928 - RNA-binding domain, RBD
  • 54928 - RNA-binding domain, RBD
  • 0.00004496Direct
    57196,57196
  • 57196 - EGF/Laminin
  • 57196 - EGF/Laminin
  • 0.00005316Direct
    90229,90229
  • 90229 - CCCH zinc finger
  • 90229 - CCCH zinc finger
  • 0.0001234Direct

    (show details)
    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    57667,57667,57667
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 57667 - beta-beta-alpha zinc fingers
  • 0.000003317Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)