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Worm Phenotype (WP): pausing variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <4>
+ + + + + 5:   behavior variant [WBPhenotype:0000517] <2>(133|132) (134|53|20)
+ + + + 4:   organism behavior variant [WBPhenotype:0000525] <21>(133|132) (134|53|20)
+ + + 3:   movement variant [WBPhenotype:0001206] <9>(65|65) (65|25|9)
+ + + 3:   locomotion variant [WBPhenotype:0000643] <9>(74|80) (74|32|15)
+ + 2:   activity level variant [WBPhenotype:0000641] <6>(23|26) (24|11|5)
+ 1:   locomotion reduced [WBPhenotype:0001213] <6>(18|19) (18|11|5)
0:   pausing variant [WBPhenotype:0002308] <3>(5|8) (6|3|0)
- 1:   Pausing decreased [WBPhenotype:0002309](0|2) (2|1|0)
- 1:   Pausing increased [WBPhenotype:0002310](0|1) (0|0|0)
- 1:   fainter [WBPhenotype:0001592](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.0000001686Direct
SNF-like0.0000003241Direct
Nicotinic receptor ligand binding domain-like0.000007629Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000007629Direct
Insulin-like0.0006279Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.0000002414Direct
SNF-like0.0000007327Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00001124Direct
Nicotinic receptor ligand binding domain-like0.00001124Direct
Rhodopsin-like0.00002484Direct
G proteins0.0001164Direct
Insulin-like0.0006663Direct
I set domains0.1997Inherited


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0.0000001362Direct
SNF-like0.0000002625Direct
Neurotransmitter-gated ion-channel transmembrane pore0.000006241Direct
Nicotinic receptor ligand binding domain-like0.000006241Direct
Insulin-like0.0005236Direct
SMAD/FHA domain0.0009114Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0.0000001362Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.000006241Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.00001759Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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