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Worm Phenotype (WP): turning frequency variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + 7:   Variant [WBPhenotype:0000886] <4>
+ + + + + + 6:   behavior variant [WBPhenotype:0000517] <2>(133|132) (134|53|20)
+ + + + + 5:   organism behavior variant [WBPhenotype:0000525] <21>(133|132) (134|53|20)
+ + + + 4:   locomotion variant [WBPhenotype:0000643] <9>(74|80) (74|32|15)
+ + + + 4:   movement variant [WBPhenotype:0001206] <9>(65|65) (65|25|9)
+ + + 3:   locomotor coordination variant [WBPhenotype:0004017] <7>(19|22) (19|7|1)
+ + 2:   directionality variant [WBPhenotype:0001702] <2>(15|16) (15|6|1)
+ 1:   turning variant [WBPhenotype:0002311] <3>(12|14) (12|5|1)
0:   turning frequency variant [WBPhenotype:0002312] <2>(12|14) (12|5|1)
- 1:   turning frequency increased [WBPhenotype:0002313](0|0) (0|0|0)
- 1:   turning frequency reduced [WBPhenotype:0002314](1|1) (1|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000000000004872Direct
SNF-like0.0000000000000624Direct
Nicotinic receptor ligand binding domain-like0.0000000000005029Direct
Insulin-like0.00000000002168Direct
Transducin (heterotrimeric G protein), gamma chain0.0000003105Direct
SMAD MH1 domain0.000004305Direct
Voltage-gated potassium channels0.00001076Direct
Ankyrin repeat0.00005668Direct
SMAD/FHA domain0.0001197Direct
cAMP-binding domain-like0.0002289Direct
P-loop containing nucleoside triphosphate hydrolases0.0007771Direct


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
SNF-like0.0000000000002609Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000000000119Direct
Nicotinic receptor ligand binding domain-like0.00000000000517Direct
Rhodopsin-like0.0000000001769Direct
Insulin-like0.0000000002266Direct
G proteins0.000000000669Direct
Transducin (heterotrimeric G protein), gamma chain0.0000006755Direct
SMAD MH1 domain0.000009331Direct
SMAD domain0.00004069Direct
Pyridoxal-dependent decarboxylase0.00007083Direct
Voltage-gated potassium channels0.0002104Direct
Ankyrin repeat0.000303Direct
cAMP-binding domain0.0003554Direct


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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Transducin (alpha subunit), insertion domain0Direct
Neurotransmitter-gated ion-channel transmembrane pore0.00000000000003852Direct
SNF-like0.00000000000004935Direct
Nicotinic receptor ligand binding domain-like0.0000000000003984Direct
Insulin-like0.00000000001726Direct
Transducin (heterotrimeric G protein), gamma chain0.0000002514Direct
SMAD MH1 domain0.00000352Direct
Voltage-gated potassium channels0.000008804Direct
Ankyrin repeat0.00004672Direct
SMAD/FHA domain0.00009892Direct
cAMP-binding domain-like0.0001894Direct
P-loop containing nucleoside triphosphate hydrolases0.00065Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
47895,52540
  • 47895 - Transducin (alpha subunit), insertion domain
  • 52540 - P-loop containing nucleoside triphosphate hydrolases
  • 0Direct
    63712,90112
  • 63712 - Nicotinic receptor ligand binding domain-like
  • 90112 - Neurotransmitter-gated ion-channel transmembrane pore
  • 0.00000000000003852Direct
    48403,48403
  • 48403 - Ankyrin repeat
  • 48403 - Ankyrin repeat
  • 0.00002713Direct
    48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001117Direct
    48726,49265
  • 48726 - Immunoglobulin
  • 49265 - Fibronectin type III
  • 0.0004195Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48726,48726,48726
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 48726 - Immunoglobulin
  • 0.0001496Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
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