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Worm Phenotype (WP): no induction of antimicrobial peptide expression after infection

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + 8:   Variant [WBPhenotype:0000886] <4>
+ + + + + + + 7:   physiology variant [WBPhenotype:0000519] <7>(487|558) (487|240|64)
+ + + + + + 6:   organism physiology variant [WBPhenotype:0000576] <10>(355|415) (355|191|56)
+ + + + + 5:   organism homeostasis metabolism variant [WBPhenotype:0000577] <17>(346|406) (348|189|55)
+ + + + 4:   organism environmental stimulus response variant [WBPhenotype:0000738] <16>(115|103) (118|51|16)
+ + + 3:   organism pathogen response variant [WBPhenotype:0001012] <9>(24|24) (25|10|3)
+ + 2:   innate immune response variant [WBPhenotype:0002164] <2>(10|11) (11|3|1)
+ 1:   antimicrobial gene expression variant [WBPhenotype:0001800] <2>(10|11) (11|3|1)
0:   no induction of antimicrobial peptide expression after infection [WBPhenotype:0002460](6|6) (6|2|1)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Histone-fold0Direct
RNA-binding domain, RBD0.00001956Direct
GroEL equatorial domain-like0.00006629Direct
GroEL-intermediate domain like0.00006629Direct
GroEL apical domain-like0.0001069Direct
Tubulin C-terminal domain-like0.0009767Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleosome core histones0Direct
Canonical RBD0.00001972Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00007047Direct
Group II chaperonin (CCT, TRIC), apical domain0.0001224Direct
Armadillo repeat0.0004324Direct
Proteasome subunits0.0008187Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Histone-fold0Direct
RNA-binding domain, RBD0.00001605Direct
GroEL-intermediate domain like0.00005463Direct
GroEL equatorial domain-like0.00005463Direct
GroEL apical domain-like0.00008829Direct
Tubulin C-terminal domain-like0.0008186Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00005463Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00005463Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00005463Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)