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Worm Phenotype (WP): no induction of antimicrobial peptide expression after infection

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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + + + + 9:   Variant [WBPhenotype:0000886] <2>
+ + + + + + + 7:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + + + 6:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + + + 5:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + + + + 5:   organism environmental stimulus response variant [WBPhenotype:0000738] <15>(138|128) (139|57|18)
+ + + + 4:   organism metabolism processing variant [WBPhenotype:0000027] <25>(178|190) (182|87|26)
+ + + + 4:   organism stress response variant [WBPhenotype:0000067] <20>(75|63) (76|26|7)
+ + + 3:   organism pathogen response variant [WBPhenotype:0001012] <10>(22|20) (23|10|3)
+ + + 3:   gene expression variant [WBPhenotype:0000717] <11>(127|139) (131|64|20)
+ + 2:   pathogen induced gene expression variant [WBPhenotype:0001857] <1>(8|9) (9|3|1)
+ + 2:   innate immune response variant [WBPhenotype:0002164] <2>(8|9) (9|3|1)
+ + 2:   antimicrobial gene expression variant [WBPhenotype:0002534] <2>(8|9) (9|3|1)
+ 1:   pathogen induced antimicrobial gene expression variant [WBPhenotype:0001800] <2>(8|9) (9|3|1)
0:   no induction of antimicrobial peptide expression after infection [WBPhenotype:0002460](5|6) (6|2|1)


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Histone-fold0Direct
RNA-binding domain, RBD0.0000197Direct
GroEL-intermediate domain like0.00006893Direct
GroEL equatorial domain-like0.00006893Direct
GroEL apical domain-like0.0001111Direct


Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleosome core histones0Direct
Canonical RBD0.00001947Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00007301Direct
Group II chaperonin (CCT, TRIC), apical domain0.0001267Direct
Armadillo repeat0.0004471Direct
Proteasome subunits0.0008453Direct


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Histone-fold0Direct
RNA-binding domain, RBD0.00001606Direct
GroEL equatorial domain-like0.00005638Direct
GroEL-intermediate domain like0.00005638Direct
GroEL apical domain-like0.00009104Direct
Tubulin C-terminal domain-like0.0008443Direct

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.00005638Direct
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00005638Direct

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.00005638Direct


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
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