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Worm Phenotype (WP): antimicrobial gene expression variant

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Root: WP Hierarchy (worm phenotype from Wormbase Release WS226)

Shortest distance to current term (+ for parents, - for children) WP term [WP ID] <#Children> (#SF|#FA) #Supra-domain
(Single|Duplex|Triple)
+ + + + + + 6:   Variant [WBPhenotype:0000886] <2>
+ + + + + 5:   physiology variant [WBPhenotype:0000519] <14>(510|587) (510|248|68)
+ + + + 4:   organism physiology variant [WBPhenotype:0000576] <9>(369|431) (372|193|56)
+ + + 3:   organism homeostasis metabolism variant [WBPhenotype:0000577] <16>(361|421) (363|190|55)
+ + 2:   organism metabolism processing variant [WBPhenotype:0000027] <25>(178|190) (182|87|26)
+ 1:   gene expression variant [WBPhenotype:0000717] <11>(127|139) (131|64|20)
0:   antimicrobial gene expression variant [WBPhenotype:0002534] <2>(8|9) (9|3|1)
- 1:   pathogen induced antimicrobial gene expression variant [WBPhenotype:0001800] <2>(8|9) (9|3|1)
- 1:   antimicrobial gene expression increased [WBPhenotype:0002539](0|0) (0|0|0)


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Superfamily

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SCOP termFDR (all)Annotation (direct or inherited)
Histone-fold0.00000000000248Direct
Cysteine-rich domain0.0007099Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.00219Inherited
GroEL-intermediate domain like0.008592Inherited
GroEL equatorial domain-like0.008592Inherited
GroEL apical domain-like0.01295Inherited
RNA-binding domain, RBD0.01498Inherited
WD40 repeat-like0.01587Inherited


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Family

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SCOP termFDR (all)Annotation (direct or inherited)
Nucleosome core histones0.00000000000009876Direct
Protein kinase cysteine-rich domain (cys2, phorbol-binding domain)0.00003731Direct
PLC-like (P variant)0.0008042Direct
Group II chaperonin (CCT, TRIC), ATPase domain0.00502Inherited
WD40-repeat0.005041Inherited
Canonical RBD0.005041Inherited
Group II chaperonin (CCT, TRIC), apical domain0.008203Inherited
Armadillo repeat0.01248Inherited
Proteasome subunits0.04196Inherited


Plot distribution on phylogenetic tree for Superfamily and/or Family domains annotated by this phenotype term
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Jump to [ Top · Phenotype Hierarchy · Superfamily · Family · Supra-domain ]

Supra-domain (including individual superfamily)

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Supra-domain (Single) FDR (all) Annotation (direct or inherited)
Histone-fold0.000000000001955Direct
Cysteine-rich domain0.0005891Direct
C2 domain (Calcium/lipid-binding domain, CaLB)0.001839Inherited
GroEL equatorial domain-like0.007368Inherited
GroEL-intermediate domain like0.007368Inherited
GroEL apical domain-like0.01119Inherited
RNA-binding domain, RBD0.01298Inherited
WD40 repeat-like0.01376Inherited
Tubulin C-terminal domain-like0.06996Inherited

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Supra-domain (Duplex) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
57889,57889
  • 57889 - Cysteine-rich domain
  • 57889 - Cysteine-rich domain
  • 0.0001409Direct
    48592,54849
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 0.007368Inherited
    54849,52029
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.007368Inherited

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    Supra-domain (Triple) in N- to C-terminal order FDR (all) Annotation (direct or inherited)
    48592,54849,52029
  • 48592 - GroEL equatorial domain-like
  • 54849 - GroEL-intermediate domain like
  • 52029 - GroEL apical domain-like
  • 0.007368Inherited


    Plot distribution on phylogenetic tree for Supra-domains (Single/Individual) annotated by this phenotype term
    Plot tree as:   Download Newick format tree:
    (show help)